RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 ERCC3P19447 782 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 USP11P51784 963 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 COL19A1Q14993 1142 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 EXOSC6Q5RKV6 272 aaKnown RBP5.99□□□□□ -1.45
XRN1-205ENST00000465507 TMEM130Q8N3G9 435 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 NECAB3Q96P71 396 aaPredicted RBP5.99□□□□□ -1.45
XRN1-205ENST00000465507 ZFYVE1Q9HBF4 777 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 PICK1Q9NRD5 415 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 ENC1O14682 589 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
XRN1-205ENST00000465507 NME2P22392 152 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 AP3B2Q13367 1082 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 SGO2Q562F6 1265 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 RPS26P11Q5JNZ5 115 aaPredicted RBP5.98□□□□□ -1.45
XRN1-205ENST00000465507 PCNX4Q63HM2 1172 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 FRMD6Q96NE9 622 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 CEP44Q9C0F1 390 aa5.98□□□□□ -1.45
XRN1-205ENST00000465507 AOC2O75106 756 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 ARNTP27540 789 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 NFKBIBQ15653 356 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 RASIP1Q5U651 963 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 ANKRD34AQ69YU3 496 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 PRR23CQ6ZRP0 262 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 TMC4Q7Z404 712 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 FBLIM1Q8WUP2 373 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 TMPRSS13Q9BYE2 586 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 NRSN2Q9GZP1 204 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 CCDC9Q9Y3X0 531 aaKnown RBP5.97□□□□□ -1.45
XRN1-205ENST00000465507 SAMM50Q9Y512 469 aa5.97□□□□□ -1.45
XRN1-205ENST00000465507 DCDC2CA8MYV0 355 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 DHX15O43143 795 aaKnown RBP5.96□□□□□ -1.46
XRN1-205ENST00000465507 CTSHP09668 335 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 ADH5P11766 374 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 ZNF16P17020 682 aaPredicted RBP5.96□□□□□ -1.46
XRN1-205ENST00000465507 ASPAP45381 313 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 TTBK2Q6IQ55 1244 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 DZIP1LQ8IYY4 767 aaKnown RBP5.96□□□□□ -1.46
XRN1-205ENST00000465507 ARMC10Q8N2F6 343 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 GPBAR1Q8TDU6 330 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 JARID2Q92833 1246 aaPredicted RBP5.96□□□□□ -1.46
XRN1-205ENST00000465507 EMILIN2Q9BXX0 1053 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 BCL11AQ9H165 835 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 SSU72Q9NP77 194 aaKnown RBP5.96□□□□□ -1.46
XRN1-205ENST00000465507 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
XRN1-205ENST00000465507 HMX2A2RU54 273 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 ZNF862O60290 1169 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 HCLS1P14317 486 aaPredicted RBP5.95□□□□□ -1.46
XRN1-205ENST00000465507 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
XRN1-205ENST00000465507 TAF1CQ15572 869 aaPredicted RBP5.95□□□□□ -1.46
XRN1-205ENST00000465507 HP1BP3Q5SSJ5 553 aaPredicted RBP5.95□□□□□ -1.46
XRN1-205ENST00000465507 CDPF1Q6NVV7 123 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 LLGL2Q6P1M3 1020 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 BEND4Q6ZU67 534 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 FBXL6Q8N531 539 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 STOML1Q9UBI4 398 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 PPP1R9AQ9ULJ8 1098 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 PCDHA4Q9UN74 947 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 TLR6Q9Y2C9 796 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 RAXQ9Y2V3 346 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 PCDHB5Q9Y5E4 795 aa5.95□□□□□ -1.46
XRN1-205ENST00000465507 PRAMEF27A3QJZ7 478 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 MINDY4BA8MYZ0 360 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 SLFN14P0C7P3 912 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 FSTP19883 344 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 BMP6P22004 513 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 MAP4P27816 1152 aaKnown RBP5.94□□□□□ -1.46
XRN1-205ENST00000465507 SEPT6Q14141 434 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 TSNAXIP1Q2TAA8 658 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 C12orf40Q86WS4 652 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 TRIM42Q8IWZ5 723 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 TMEM87AQ8NBN3 555 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 SMG8Q8ND04 991 aaKnown RBP5.94□□□□□ -1.46
XRN1-205ENST00000465507 FAM46AQ96IP4 442 aaKnown RBP5.94□□□□□ -1.46
XRN1-205ENST00000465507 MYRFLQ96LU7 910 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 FAM105AQ9NUU6 356 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 PPM1HQ9ULR3 514 aa5.94□□□□□ -1.46
XRN1-205ENST00000465507 MEGF11A6BM72 1044 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 NFICP08651 508 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 HNRNPUQ00839 825 aaKnown RBP eCLIP5.93□□□□□ -1.46
XRN1-205ENST00000465507 ID3Q02535 119 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 LRRC14Q15048 493 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 Q6ZS46 218 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.93□□□□□ -1.46
XRN1-205ENST00000465507 SV2BQ7L1I2 683 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 PDZD3Q86UT5 571 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 FAM20CQ8IXL6 584 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 C2CD4AQ8NCU7 369 aaPredicted RBP5.93□□□□□ -1.46
XRN1-205ENST00000465507 ELMO3Q96BJ8 720 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 MFSD14AQ96MC6 490 aa5.93□□□□□ -1.46
XRN1-205ENST00000465507 TMPRSS2O15393 492 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 EIF4EBP3O60516 100 aaPredicted RBP5.92□□□□□ -1.46
XRN1-205ENST00000465507 GBP2P32456 591 aaPredicted RBP5.92□□□□□ -1.46
XRN1-205ENST00000465507 LIG3P49916 1009 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 FAM160A1Q05DH4 1040 aa5.92□□□□□ -1.46
XRN1-205ENST00000465507 TTLL4Q14679 1199 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms