RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 SNCAIPQ9Y6H5 919 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 SPDYE5A6NIY4 337 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 SEMA3EO15041 775 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 SP3Q02447 781 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 TCP10Q12799 353 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 CCDC102BQ68D86 513 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 TNNQ9UQP3 1299 aa25.91■■□□□ 1.74
CSPG5-204ENST00000465441 SALL1Q9NSC2 1324 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 IPO8O15397 1037 aaKnown RBP25.9■■□□□ 1.74
CSPG5-204ENST00000465441 SRGAP3O43295 1099 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 BCAR3O75815 825 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 DCAF15Q66K64 600 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 ERO1BQ86YB8 467 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 USP40Q9NVE5 1235 aa25.9■■□□□ 1.74
CSPG5-204ENST00000465441 MYH13Q9UKX3 1938 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 ZBTB22O15209 634 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 NFIAQ12857 509 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 FAM43AQ8N2R8 423 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 ZNF341Q9BYN7 854 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 ZFYVE28Q9HCC9 887 aa25.89■■□□□ 1.74
CSPG5-204ENST00000465441 TRIM27P14373 513 aa25.88■■□□□ 1.73
CSPG5-204ENST00000465441 CAP1Q01518 475 aa25.88■■□□□ 1.73
CSPG5-204ENST00000465441 TFCP2Q12800 502 aa25.88■■□□□ 1.73
CSPG5-204ENST00000465441 MTX1Q13505 466 aa25.88■■□□□ 1.73
CSPG5-204ENST00000465441 TAF1CQ15572 869 aaPredicted RBP25.88■■□□□ 1.73
CSPG5-204ENST00000465441 FRAT1Q92837 279 aaPredicted RBP25.88■■□□□ 1.73
CSPG5-204ENST00000465441 RPAP1Q9BWH6 1393 aaPredicted RBP25.87■■□□□ 1.73
CSPG5-204ENST00000465441 IRF6O14896 467 aa25.87■■□□□ 1.73
CSPG5-204ENST00000465441 ATF7IPQ6VMQ6 1270 aa25.87■■□□□ 1.73
CSPG5-204ENST00000465441 EFCC1Q9HA90 598 aa25.87■■□□□ 1.73
CSPG5-204ENST00000465441 FAM198AQ9UFP1 575 aa25.87■■□□□ 1.73
CSPG5-204ENST00000465441 PTPN22Q9Y2R2 807 aa25.87■■□□□ 1.73
CSPG5-204ENST00000465441 A0A1B0GUL7 405 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 INPP5BP32019 993 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 ZFPM1Q8IX07 1006 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 ZGPATQ8N5A5 531 aaKnown RBP25.86■■□□□ 1.73
CSPG5-204ENST00000465441 XAGE2Q96GT9 111 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 ZNF112Q9UJU3 913 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 AKAP2Q9Y2D5 859 aa25.86■■□□□ 1.73
CSPG5-204ENST00000465441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.86■■□□□ 1.73
CSPG5-204ENST00000465441 CETPP11597 493 aa25.85■■□□□ 1.73
CSPG5-204ENST00000465441 PPIL2Q13356 520 aa25.85■■□□□ 1.73
CSPG5-204ENST00000465441 RASGRF1Q13972 1273 aa25.85■■□□□ 1.73
CSPG5-204ENST00000465441 CLUAP1Q96AJ1 413 aa25.85■■□□□ 1.73
CSPG5-204ENST00000465441 GNAI2P04899 355 aa25.84■■□□□ 1.73
CSPG5-204ENST00000465441 PPATQ06203 517 aa25.84■■□□□ 1.73
CSPG5-204ENST00000465441 SNAPC2Q13487 334 aa25.84■■□□□ 1.73
CSPG5-204ENST00000465441 ABCF2Q9UG63 623 aa25.84■■□□□ 1.73
CSPG5-204ENST00000465441 BTBD19C9JJ37 291 aa25.83■■□□□ 1.73
CSPG5-204ENST00000465441 NEUROD6Q96NK8 337 aa25.83■■□□□ 1.73
CSPG5-204ENST00000465441 FAM163AQ96GL9 167 aaPredicted RBP25.82■■□□□ 1.72
CSPG5-204ENST00000465441 AK9Q5TCS8 1911 aa25.81■■□□□ 1.72
CSPG5-204ENST00000465441 PNMA6EA0A0J9YXQ4 647 aa25.81■■□□□ 1.72
CSPG5-204ENST00000465441 MVPQ14764 893 aaKnown RBP25.81■■□□□ 1.72
CSPG5-204ENST00000465441 IDI2Q9BXS1 227 aa25.81■■□□□ 1.72
CSPG5-204ENST00000465441 ZCCHC17Q9NP64 241 aaKnown RBP25.81■■□□□ 1.72
CSPG5-204ENST00000465441 GAKO14976 1311 aa25.81■■□□□ 1.72
CSPG5-204ENST00000465441 PDS5AQ29RF7 1337 aaKnown RBP25.81■■□□□ 1.72
CSPG5-204ENST00000465441 TLR2O60603 784 aa25.8■■□□□ 1.72
CSPG5-204ENST00000465441 WDHD1O75717 1129 aaPredicted RBP25.8■■□□□ 1.72
CSPG5-204ENST00000465441 RGS3P49796 1198 aa25.8■■□□□ 1.72
CSPG5-204ENST00000465441 SPTY2D1Q68D10 685 aaPredicted RBP25.8■■□□□ 1.72
CSPG5-204ENST00000465441 DZIP1Q86YF9 867 aaKnown RBP25.8■■□□□ 1.72
CSPG5-204ENST00000465441 ENTPD3O75355 529 aa25.79■■□□□ 1.72
CSPG5-204ENST00000465441 G3BP1Q13283 466 aaKnown RBP eCLIP25.79■■□□□ 1.72
CSPG5-204ENST00000465441 ARHGEF6Q15052 776 aa25.79■■□□□ 1.72
CSPG5-204ENST00000465441 SLF2Q8IX21 1173 aa25.79■■□□□ 1.72
CSPG5-204ENST00000465441 TMEM57Q8N5G2 664 aa25.79■■□□□ 1.72
CSPG5-204ENST00000465441 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.79■■□□□ 1.72
CSPG5-204ENST00000465441 TNRC18O15417 2968 aaPredicted RBP25.79■■□□□ 1.72
CSPG5-204ENST00000465441 NOL9Q5SY16 702 aaKnown RBP25.78■■□□□ 1.72
CSPG5-204ENST00000465441 ZKSCAN2Q63HK3 967 aa25.78■■□□□ 1.72
CSPG5-204ENST00000465441 ERICH6Q7L0X2 663 aa25.78■■□□□ 1.72
CSPG5-204ENST00000465441 SH3BP5LQ7L8J4 393 aa25.78■■□□□ 1.72
CSPG5-204ENST00000465441 HMG20BQ9P0W2 317 aa25.78■■□□□ 1.72
CSPG5-204ENST00000465441 MYH2Q9UKX2 1941 aa25.78■■□□□ 1.72
CSPG5-204ENST00000465441 POTEFA5A3E0 1075 aa25.77■■□□□ 1.72
CSPG5-204ENST00000465441 MIER1Q8N108 512 aa25.77■■□□□ 1.72
CSPG5-204ENST00000465441 KCNH4Q9UQ05 1017 aa25.77■■□□□ 1.72
CSPG5-204ENST00000465441 BTDP43251 543 aa25.76■■□□□ 1.71
CSPG5-204ENST00000465441 MECOMQ03112 1051 aa25.76■■□□□ 1.71
CSPG5-204ENST00000465441 GORABQ5T7V8 394 aa25.76■■□□□ 1.71
CSPG5-204ENST00000465441 ARMC5Q96C12 935 aa25.76■■□□□ 1.71
CSPG5-204ENST00000465441 PHF20L1A8MW92 1017 aa25.75■■□□□ 1.71
CSPG5-204ENST00000465441 HNRNPUQ00839 825 aaKnown RBP eCLIP25.75■■□□□ 1.71
CSPG5-204ENST00000465441 TBC1D9Q6ZT07 1266 aa25.75■■□□□ 1.71
CSPG5-204ENST00000465441 ANKRD23Q86SG2 305 aa25.75■■□□□ 1.71
CSPG5-204ENST00000465441 ZSCAN29Q8IWY8 852 aaPredicted RBP25.75■■□□□ 1.71
CSPG5-204ENST00000465441 ZNF384Q8TF68 577 aa25.75■■□□□ 1.71
CSPG5-204ENST00000465441 DDX4Q9NQI0 724 aaKnown RBP25.75■■□□□ 1.71
CSPG5-204ENST00000465441 MROH7-TTC4A0A0A0MT08 1334 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 GPR75-ASB3A0A0A6YYF3 556 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 DDTLA6NHG4 134 aaPredicted RBP25.74■■□□□ 1.71
CSPG5-204ENST00000465441 SLURP2P0DP57 97 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 MAP3K10Q02779 954 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 MOGSQ13724 837 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 C17orf99Q6UX52 265 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 PI16Q6UXB8 463 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 SPATA5Q8NB90 893 aa25.74■■□□□ 1.71
CSPG5-204ENST00000465441 ARHGAP39Q9C0H5 1083 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms