RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
EXOSC3-203ENST00000465229 MYH7P12883 1935 aa20.29■□□□□ 0.84
EXOSC3-203ENST00000465229 MAGEB6P1A0A0J9YX57 407 aa20.29■□□□□ 0.84
EXOSC3-203ENST00000465229 MBD4O95243 580 aa20.29■□□□□ 0.84
EXOSC3-203ENST00000465229 RBM5P52756 815 aaKnown RBP eCLIP20.29■□□□□ 0.841e-14■■■■■ 51.6
EXOSC3-203ENST00000465229 CCDC129Q6ZRS4 1044 aa20.29■□□□□ 0.84
EXOSC3-203ENST00000465229 GPAA1O43292 621 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 BTDP43251 543 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 SLC4A3P48751 1232 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 AIDAQ96BJ3 306 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 ARMT1Q9H993 441 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 MYOZ2Q9NPC6 264 aa20.28■□□□□ 0.84
EXOSC3-203ENST00000465229 H7C1D1 291 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 BAG3O95817 575 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 EPS15P42566 896 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 LCORLQ8N3X6 602 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 MTMR14Q8NCE2 650 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 PRMT6Q96LA8 375 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 RAD50Q92878 1312 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 MYH2Q9UKX2 1941 aa20.27■□□□□ 0.84
EXOSC3-203ENST00000465229 EGFRP00533 1210 aa20.27■□□□□ 0.83
EXOSC3-203ENST00000465229 DLGAP5Q15398 846 aa20.27■□□□□ 0.83
EXOSC3-203ENST00000465229 SAMD7Q7Z3H4 446 aa20.27■□□□□ 0.83
EXOSC3-203ENST00000465229 ZBED3Q96IU2 234 aaPredicted RBP20.27■□□□□ 0.83
EXOSC3-203ENST00000465229 NOL10Q9BSC4 688 aaKnown RBP20.27■□□□□ 0.83
EXOSC3-203ENST00000465229 MAST2Q6P0Q8 1798 aa20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 RHBDL3P58872 404 aa20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 RBM26Q5T8P6 1007 aaKnown RBP20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 CCDC171Q6TFL3 1326 aa20.26■□□□□ 0.83
EXOSC3-203ENST00000465229 CDC42EP5Q6NZY7 148 aa20.25■□□□□ 0.83
EXOSC3-203ENST00000465229 SH3RF3Q8TEJ3 882 aaPredicted RBP20.25■□□□□ 0.83
EXOSC3-203ENST00000465229 TBC1D2Q9BYX2 928 aa20.25■□□□□ 0.83
EXOSC3-203ENST00000465229 PRKAB2O43741 272 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 TBC1D10BQ4KMP7 808 aaPredicted RBP20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 SNX21Q969T3 373 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 WNT10BO00744 389 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 PLCG2P16885 1265 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 NBPF9Q3BBW0 867 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 CERS3Q8IU89 383 aa20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 TDRD3Q9H7E2 651 aaKnown RBP20.24■□□□□ 0.83
EXOSC3-203ENST00000465229 POTECB2RU33 542 aa20.23■□□□□ 0.83
EXOSC3-203ENST00000465229 FOXP2O15409 715 aa20.23■□□□□ 0.83
EXOSC3-203ENST00000465229 TRPM4Q8TD43 1214 aa20.23■□□□□ 0.83
EXOSC3-203ENST00000465229 SLC4A4Q9Y6R1 1079 aa20.23■□□□□ 0.83
EXOSC3-203ENST00000465229 HSPD1P10809 573 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 GNAT2P19087 354 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 PTH1RQ03431 593 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 KIF4BQ2VIQ3 1234 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 KIAA1211Q6ZU35 1233 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 LSG1Q9H089 658 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 ADARB2Q9NS39 739 aaKnown RBP20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 ADAMTSL1Q8N6G6 1762 aa20.22■□□□□ 0.83
EXOSC3-203ENST00000465229 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 PATL2C9JE40 543 aaKnown RBP20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 HIRAP54198 1017 aaPredicted RBP20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 SDR42E1Q8WUS8 393 aa20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
EXOSC3-203ENST00000465229 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 REC8O95072 547 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 KIF2CQ99661 725 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 USP26Q9BXU7 913 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 CLRN2A0PK11 232 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 APPP05067 770 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 CACNB3P54284 484 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 SPDYE2Q495Y8 402 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 TGFBRAP1Q8WUH2 860 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 DSCC1Q9BVC3 393 aa20.2■□□□□ 0.82
EXOSC3-203ENST00000465229 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 MYO1BO43795 1136 aa20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 EPHX2P34913 555 aa20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 NFIAQ12857 509 aa20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 MAP4K1Q92918 833 aa20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
EXOSC3-203ENST00000465229 ASTN2O75129 1339 aaPredicted RBP20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 USP5P45974 858 aa20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 IFNL3Q8IZI9 196 aa20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 IDI2Q9BXS1 227 aa20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 DDX4Q9NQI0 724 aaKnown RBP20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 ATP8A2Q9NTI2 1148 aa20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
EXOSC3-203ENST00000465229 EPB41L2O43491 1005 aaKnown RBP20.17■□□□□ 0.82
EXOSC3-203ENST00000465229 FGAP02671 866 aa20.17■□□□□ 0.82
EXOSC3-203ENST00000465229 ALX1Q15699 326 aa20.17■□□□□ 0.82
EXOSC3-203ENST00000465229 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
EXOSC3-203ENST00000465229 FAM198AQ9UFP1 575 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms