RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 RBM8AQ9Y5S9 174 aaKnown RBP8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 TLL2Q9Y6L7 1015 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 ZBTB7CA1YPR0 619 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 AP5Z1O43299 807 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 LIG1P18858 919 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 AMPHP49418 695 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 FAM160A1Q05DH4 1040 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 TUBB2AQ13885 445 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 ME3Q16798 604 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 MTHFSDQ2M296 383 aaKnown RBP8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 TSHZ3Q63HK5 1081 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 UNC5CLQ8IV45 518 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 CKAP2LQ8IYA6 745 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 FOXJ1Q92949 421 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 TUBB2BQ9BVA1 445 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 DNAJC25Q9H1X3 360 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 RCOR1Q9UKL0 485 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 ZNF215Q9UL58 517 aaPredicted RBP8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 WASF2Q9Y6W5 498 aa8.35□□□□□ -1.07
CLSTN1-204ENST00000464286 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 USP54Q70EL1 1684 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 NRXN3Q9Y4C0 1643 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 A0A1W2PQ27 194 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 A0A1W2PQ64 194 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 A0A1W2PQD8 194 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 EFCAB8A8MWE9 144 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 H2AFXP16104 143 aaPredicted RBP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 CYP2C19P33261 490 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 LRMPQ12912 555 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 G3BP1Q13283 466 aaKnown RBP eCLIP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 IQCB1Q15051 598 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 CAMK4Q16566 473 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 LRRFIP1Q32MZ4 808 aaKnown RBP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 MUM1L1Q5H9M0 696 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 CCDC158Q5M9N0 1113 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 HELBQ8NG08 1087 aaPredicted RBP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 IPO4Q8TEX9 1081 aaKnown RBP8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 GTF3C6Q969F1 213 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 SPG7Q9UQ90 795 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 OVOS2A0A0G2JMS6 1433 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 JCADQ9P266 1359 aa8.34□□□□□ -1.07
CLSTN1-204ENST00000464286 MAP3K19Q56UN5 1328 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 SLC27A2O14975 620 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 IVLP07476 585 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 RESTQ13127 1097 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 NCAPD2Q15021 1401 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 FBXO38Q6PIJ6 1188 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 CDC37L1Q7L3B6 337 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 CCAR1Q8IX12 1150 aaKnown RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 PROCA1Q8NCQ7 364 aaPredicted RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 KCNG4Q8TDN1 519 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 FSD1Q9BTV5 496 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 PSD3Q9NYI0 1048 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 DNAI1Q9UI46 699 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 HOOK1Q9UJC3 728 aaKnown RBP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 PLEKHG1Q9ULL1 1385 aa8.33□□□□□ -1.08
CLSTN1-204ENST00000464286 FAM177BA6PVY3 158 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 TULP2O00295 520 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 IKBKBO14920 756 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 EIF3JO75822 258 aaKnown RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 TNNT3P45378 269 aaPredicted RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 ETF1P62495 437 aaKnown RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 CCZ1BP86790 482 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 CCZ1P86791 482 aaPredicted RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 PSME1Q06323 249 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 ELF2Q15723 593 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 HOMER1Q86YM7 354 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 MRPS27Q92552 414 aaKnown RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 NEK1Q96PY6 1258 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 MPHOSPH8Q99549 860 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 DBF4Q9UBU7 674 aaPredicted RBP8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
CLSTN1-204ENST00000464286 ACEP12821 1306 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 KDM3BQ7LBC6 1761 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 ERLIN1O75477 346 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 LARGE1O95461 756 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 YEATS4O95619 227 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 FBLN1P23142 703 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 BEND3Q5T5X7 828 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 USPL1Q5W0Q7 1092 aa8.31□□□□□ -1.08
CLSTN1-204ENST00000464286 LARP1Q6PKG0 1096 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms