RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 RFX7Q2KHR2 1363 aa21.61■■□□□ 1.05
VPS52-214ENST00000463486 IGSF3O75054 1194 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 HUNKP57058 714 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 RHBDL3P58872 404 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 NFIAQ12857 509 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 TNFAIP1Q13829 316 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 ADGRA1Q86SQ6 560 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 FAM83AQ86UY5 434 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 USP40Q9NVE5 1235 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 FAM198AQ9UFP1 575 aa21.6■■□□□ 1.05
VPS52-214ENST00000463486 BTDP43251 543 aa21.59■■□□□ 1.05
VPS52-214ENST00000463486 CYP4F22Q6NT55 531 aa21.59■■□□□ 1.05
VPS52-214ENST00000463486 SLF2Q8IX21 1173 aa21.59■■□□□ 1.05
VPS52-214ENST00000463486 FZD1Q9UP38 647 aa21.59■■□□□ 1.05
VPS52-214ENST00000463486 PAPPA2Q9BXP8 1791 aa21.59■■□□□ 1.05
VPS52-214ENST00000463486 WDHD1O75717 1129 aaPredicted RBP21.58■■□□□ 1.05
VPS52-214ENST00000463486 GSTO1P78417 241 aa21.58■■□□□ 1.05
VPS52-214ENST00000463486 ZFPM1Q8IX07 1006 aa21.58■■□□□ 1.05
VPS52-214ENST00000463486 SMC5Q8IY18 1101 aa21.58■■□□□ 1.05
VPS52-214ENST00000463486 OTUD7AQ8TE49 926 aaPredicted RBP21.58■■□□□ 1.05
VPS52-214ENST00000463486 GCC1Q96CN9 775 aa21.58■■□□□ 1.05
VPS52-214ENST00000463486 IDI2Q9BXS1 227 aa21.58■■□□□ 1.05
VPS52-214ENST00000463486 SALL3Q9BXA9 1300 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 UBE2Q2LH0YL09 131 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 LDHCP07864 332 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 MAP3K11Q16584 847 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 SUPT20HL1Q3ZLR7 823 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 LDLRAD1Q5T700 205 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 FAM151AQ8WW52 585 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 EDC3Q96F86 508 aaKnown RBP21.57■■□□□ 1.04
VPS52-214ENST00000463486 CAPNS2Q96L46 248 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 HAUS7Q99871 368 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 BOLA2Q9H3K6 86 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
VPS52-214ENST00000463486 WDR33Q9C0J8 1336 aaKnown RBP21.56■■□□□ 1.04
VPS52-214ENST00000463486 FAM155AB1AL88 458 aaPredicted RBP21.56■■□□□ 1.04
VPS52-214ENST00000463486 USP2O75604 605 aaPredicted RBP21.56■■□□□ 1.04
VPS52-214ENST00000463486 TNNI2P48788 182 aa21.56■■□□□ 1.04
VPS52-214ENST00000463486 PPP4CP60510 307 aa21.56■■□□□ 1.04
VPS52-214ENST00000463486 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
VPS52-214ENST00000463486 TMOD2Q9NZR1 351 aa21.56■■□□□ 1.04
VPS52-214ENST00000463486 DOCK2Q92608 1830 aa21.56■■□□□ 1.04
VPS52-214ENST00000463486 GOLIM4O00461 696 aa21.55■■□□□ 1.04
VPS52-214ENST00000463486 RGMBQ6NW40 437 aa21.55■■□□□ 1.04
VPS52-214ENST00000463486 RWDD1Q9H446 243 aaPredicted RBP21.55■■□□□ 1.04
VPS52-214ENST00000463486 DDX4Q9NQI0 724 aaKnown RBP21.55■■□□□ 1.04
VPS52-214ENST00000463486 RPAP1Q9BWH6 1393 aaPredicted RBP21.55■■□□□ 1.04
VPS52-214ENST00000463486 MAST2Q6P0Q8 1798 aa21.55■■□□□ 1.04
VPS52-214ENST00000463486 IDH1O75874 414 aaKnown RBP21.54■■□□□ 1.04
VPS52-214ENST00000463486 NF2P35240 595 aa21.54■■□□□ 1.04
VPS52-214ENST00000463486 PRKG1Q13976 671 aa21.54■■□□□ 1.04
VPS52-214ENST00000463486 ANKRD45Q5TZF3 282 aa21.54■■□□□ 1.04
VPS52-214ENST00000463486 TSHZ3Q63HK5 1081 aa21.54■■□□□ 1.04
VPS52-214ENST00000463486 SH3BP5LQ7L8J4 393 aa21.54■■□□□ 1.04
VPS52-214ENST00000463486 DNAJC2Q99543 621 aaKnown RBP21.54■■□□□ 1.04
VPS52-214ENST00000463486 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
VPS52-214ENST00000463486 MAP4K4O95819 1239 aaPredicted RBP21.53■■□□□ 1.04
VPS52-214ENST00000463486 RGS3P49796 1198 aa21.53■■□□□ 1.04
VPS52-214ENST00000463486 TTF1Q15361 905 aaPredicted RBP21.53■■□□□ 1.04
VPS52-214ENST00000463486 ZIC5Q96T25 663 aa21.53■■□□□ 1.04
VPS52-214ENST00000463486 PAG1Q9NWQ8 432 aa21.53■■□□□ 1.04
VPS52-214ENST00000463486 THSD7BQ9C0I4 1608 aa21.53■■□□□ 1.04
VPS52-214ENST00000463486 TCRBV5S4A2TA0A5A2 114 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 AOC2O75106 756 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 ENTPD3O75355 529 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 CYP7A1P22680 504 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 TCP10Q12799 353 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 TMED8Q6PL24 325 aaPredicted RBP21.52■■□□□ 1.04
VPS52-214ENST00000463486 MAGEB6Q8N7X4 407 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 PI4K2BQ8TCG2 481 aa21.52■■□□□ 1.04
VPS52-214ENST00000463486 SH3RF3Q8TEJ3 882 aaPredicted RBP21.52■■□□□ 1.04
VPS52-214ENST00000463486 ANGEL1Q9UNK9 670 aaKnown RBP21.52■■□□□ 1.04
VPS52-214ENST00000463486 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
VPS52-214ENST00000463486 ECE1P42892 770 aa21.51■■□□□ 1.03
VPS52-214ENST00000463486 ZNF157P51786 506 aaPredicted RBP21.51■■□□□ 1.03
VPS52-214ENST00000463486 MAP3K12Q12852 859 aa21.51■■□□□ 1.03
VPS52-214ENST00000463486 ARMC9Q7Z3E5 817 aa21.51■■□□□ 1.03
VPS52-214ENST00000463486 AATFQ9NY61 560 aaKnown RBP eCLIP21.51■■□□□ 1.03
VPS52-214ENST00000463486 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
VPS52-214ENST00000463486 SLC10A3P09131 477 aa21.5■■□□□ 1.03
VPS52-214ENST00000463486 PDE6AP16499 860 aa21.5■■□□□ 1.03
VPS52-214ENST00000463486 DYNLL1P63167 89 aaKnown RBP21.5■■□□□ 1.03
VPS52-214ENST00000463486 TTLL12Q14166 644 aaPredicted RBP21.5■■□□□ 1.03
VPS52-214ENST00000463486 RASAL3Q86YV0 1011 aa21.5■■□□□ 1.03
VPS52-214ENST00000463486 STAP2Q9UGK3 403 aa21.5■■□□□ 1.03
VPS52-214ENST00000463486 TTC41PQ6P2S7 1318 aa21.5■■□□□ 1.03
VPS52-214ENST00000463486 DDTLA6NHG4 134 aaPredicted RBP21.49■■□□□ 1.03
VPS52-214ENST00000463486 UNCXA6NJT0 531 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 CHGBP05060 677 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 MAP2K2P36507 400 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 NUCB1Q02818 461 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 PAXIP1Q6ZW49 1069 aaPredicted RBP21.49■■□□□ 1.03
VPS52-214ENST00000463486 CCDC102AQ96A19 550 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 CLMNQ96JQ2 1002 aa21.49■■□□□ 1.03
VPS52-214ENST00000463486 RIOK1Q9BRS2 568 aaKnown RBP21.49■■□□□ 1.03
VPS52-214ENST00000463486 BAG3O95817 575 aa21.48■■□□□ 1.03
VPS52-214ENST00000463486 MX1P20591 662 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms