RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 KCNH4Q9UQ05 1017 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 MAST2Q6P0Q8 1798 aa17.42■□□□□ 0.38
C9orf3-211ENST00000463372 FKBP1AP62942 108 aaKnown RBP17.41■□□□□ 0.38
C9orf3-211ENST00000463372 GRIN2CQ14957 1233 aa17.41■□□□□ 0.38
C9orf3-211ENST00000463372 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
C9orf3-211ENST00000463372 ANKRD2Q9GZV1 360 aa17.4■□□□□ 0.38
C9orf3-211ENST00000463372 CHPF2Q9P2E5 772 aa17.4■□□□□ 0.38
C9orf3-211ENST00000463372 PCCAP05165 728 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-211ENST00000463372 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
C9orf3-211ENST00000463372 MOGSQ13724 837 aa17.39■□□□□ 0.37
C9orf3-211ENST00000463372 DCAF15Q66K64 600 aa17.38■□□□□ 0.37
C9orf3-211ENST00000463372 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
C9orf3-211ENST00000463372 SMCR8Q8TEV9 937 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-211ENST00000463372 NECAB3Q96P71 396 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-211ENST00000463372 GAS2L1Q99501 681 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-211ENST00000463372 SERPINA10Q9UK55 444 aa17.38■□□□□ 0.37
C9orf3-211ENST00000463372 TRIM32Q13049 653 aa17.37■□□□□ 0.37
C9orf3-211ENST00000463372 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
C9orf3-211ENST00000463372 GPAT2Q6NUI2 795 aa17.37■□□□□ 0.37
C9orf3-211ENST00000463372 DZIP1LQ8IYY4 767 aaKnown RBP17.37■□□□□ 0.37
C9orf3-211ENST00000463372 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-211ENST00000463372 EPHX3Q9H6B9 360 aa17.37■□□□□ 0.37
C9orf3-211ENST00000463372 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-211ENST00000463372 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
C9orf3-211ENST00000463372 CTSWP56202 376 aa17.36■□□□□ 0.37
C9orf3-211ENST00000463372 ZNF341Q9BYN7 854 aa17.36■□□□□ 0.37
C9orf3-211ENST00000463372 JAG2Q9Y219 1238 aa17.36■□□□□ 0.37
C9orf3-211ENST00000463372 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
C9orf3-211ENST00000463372 INPP5BP32019 993 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 POTEEQ6S8J3 1075 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 FASTKD5Q7L8L6 764 aaKnown RBP17.34■□□□□ 0.37
C9orf3-211ENST00000463372 ZNF804AQ7Z570 1209 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 GREM2Q9H772 168 aa17.34■□□□□ 0.37
C9orf3-211ENST00000463372 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
C9orf3-211ENST00000463372 IL1R1P14778 569 aa17.33■□□□□ 0.36
C9orf3-211ENST00000463372 SENP6Q9GZR1 1112 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-211ENST00000463372 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
C9orf3-211ENST00000463372 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-211ENST00000463372 FRMPD3Q5JV73 1810 aa17.33■□□□□ 0.36
C9orf3-211ENST00000463372 CXCL11O14625 94 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 MIGA2Q7L4E1 593 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 ANKRD13CQ8N6S4 541 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 MYD88Q99836 296 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 TSPYL2Q9H2G4 693 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-211ENST00000463372 BABAM1Q9NWV8 329 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
C9orf3-211ENST00000463372 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
C9orf3-211ENST00000463372 GPR37L1O60883 481 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 CCDC85BQ15834 202 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-211ENST00000463372 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 RNPC3Q96LT9 517 aaKnown RBP17.31■□□□□ 0.36
C9orf3-211ENST00000463372 MPHOSPH8Q99549 860 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 TMOD2Q9NZR1 351 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 SLC45A1Q9Y2W3 748 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 PTPRFP10586 1907 aa17.31■□□□□ 0.36
C9orf3-211ENST00000463372 DNAJB2P25686 324 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 CRKP46108 304 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 CACNB3P54284 484 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 MFSD14BQ5SR56 506 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 TRIB2Q92519 343 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 BADQ92934 168 aa17.3■□□□□ 0.36
C9orf3-211ENST00000463372 PLXNB2O15031 1838 aa17.29■□□□□ 0.36
C9orf3-211ENST00000463372 BMP1P13497 986 aa17.29■□□□□ 0.36
C9orf3-211ENST00000463372 ATN1P54259 1190 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-211ENST00000463372 FAM110CQ1W6H9 321 aa17.29■□□□□ 0.36
C9orf3-211ENST00000463372 FAM83AQ86UY5 434 aa17.29■□□□□ 0.36
C9orf3-211ENST00000463372 PRDM5Q9NQX1 630 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-211ENST00000463372 RTP1P59025 263 aa17.28■□□□□ 0.36
C9orf3-211ENST00000463372 CHRNDQ07001 517 aa17.28■□□□□ 0.36
C9orf3-211ENST00000463372 AAK1Q2M2I8 961 aa17.28■□□□□ 0.36
C9orf3-211ENST00000463372 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
C9orf3-211ENST00000463372 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-211ENST00000463372 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-211ENST00000463372 CXXC1Q9P0U4 656 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-211ENST00000463372 GJD2Q9UKL4 321 aa17.27■□□□□ 0.36
C9orf3-211ENST00000463372 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.36
C9orf3-211ENST00000463372 XIRP2A4UGR9 3374 aa17.27■□□□□ 0.35
C9orf3-211ENST00000463372 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-211ENST00000463372 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-211ENST00000463372 FAM86C2PA6NEL3 165 aa17.26■□□□□ 0.35
C9orf3-211ENST00000463372 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
C9orf3-211ENST00000463372 LHX8Q68G74 356 aa17.26■□□□□ 0.35
C9orf3-211ENST00000463372 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
C9orf3-211ENST00000463372 ZDBF2Q9HCK1 2354 aa17.26■□□□□ 0.35
C9orf3-211ENST00000463372 PLXNA1Q9UIW2 1896 aa17.26■□□□□ 0.35
C9orf3-211ENST00000463372 RLFQ13129 1914 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 SNAP23O00161 211 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 CYP2B6P20813 491 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 ZNF112Q9UJU3 913 aa17.25■□□□□ 0.35
C9orf3-211ENST00000463372 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-211ENST00000463372 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms