RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
SEMA3D-203ENST00000463315 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
SEMA3D-203ENST00000463315 GPR75-ASB3A0A0A6YYF3 556 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 SUPT20HL1Q3ZLR7 823 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 VEZTQ9HBM0 779 aa16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
SEMA3D-203ENST00000463315 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 CNTNAP1P78357 1384 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 UNCXA6NJT0 531 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 RASA3Q14644 834 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 TBC1D9Q6ZT07 1266 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
SEMA3D-203ENST00000463315 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 ZNF384Q8TF68 577 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 IDI2Q9BXS1 227 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 AOX1Q06278 1338 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 TTC41PQ6P2S7 1318 aa16.69■□□□□ 0.26
SEMA3D-203ENST00000463315 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 PLCG2P16885 1265 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 ECE1P42892 770 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 HTRA3P83110 453 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 HAUS7Q99871 368 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
SEMA3D-203ENST00000463315 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 PPP1R12BO60237 982 aaPredicted RBP16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 ENTPD3O75355 529 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 BAG3O95817 575 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 PPP4CP60510 307 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 JMYQ8N9B5 988 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 PIH1D3Q9NQM4 214 aaKnown RBP16.67■□□□□ 0.26
SEMA3D-203ENST00000463315 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 TCP10L2B9ZVM9 353 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 ERC2O15083 957 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 BTDP43251 543 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 HUNKP57058 714 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 MAST2Q6P0Q8 1798 aa16.66■□□□□ 0.26
SEMA3D-203ENST00000463315 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 RHBDL3P58872 404 aa16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 PRAMEF18Q5VWM3 479 aa16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 SCAF8Q9UPN6 1271 aaKnown RBP16.65■□□□□ 0.26
SEMA3D-203ENST00000463315 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.26
SEMA3D-203ENST00000463315 GLRX3O76003 335 aaKnown RBP16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 IGHDP01880 384 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 PRR29P0C7W0 189 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 FAM198AQ9UFP1 575 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 STAP2Q9UGK3 403 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
SEMA3D-203ENST00000463315 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 GOLIM4O00461 696 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 WDHD1O75717 1129 aaPredicted RBP16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 MX1P20591 662 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 CYP7A1P22680 504 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 MAP2K2P36507 400 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 CACNB3P54284 484 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 NUCB1Q02818 461 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 NBPF12Q5TAG4 269 aaPredicted RBP16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
SEMA3D-203ENST00000463315 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 VEGFBP49765 207 aa16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 NFIAQ12857 509 aa16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 DCAF15Q66K64 600 aa16.62■□□□□ 0.25
SEMA3D-203ENST00000463315 ZSCAN25Q6NSZ9 544 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms