RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PIP4K2AP48426 406 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 CLCN6P51797 869 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ANTXR2P58335 489 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TIMM10P62072 90 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 SSRP1Q08945 709 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 GPS2Q13227 327 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 NCAPHQ15003 741 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TTF1Q15361 905 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ERCC6LQ2NKX8 1250 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 LRRC24Q50LG9 513 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 AXDND1Q5T1B0 1012 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 JAKMIP3Q5VZ66 844 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 RESP18Q5W5W9 173 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 CCDC102BQ68D86 513 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 KRT40Q6A162 431 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TTLL5Q6EMB2 1281 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 KIF6Q6ZMV9 814 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 VPS37DQ86XT2 251 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ELOA2Q8IYF1 753 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TXLNBQ8N3L3 684 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 KRI1Q8N9T8 703 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 RBM33Q96EV2 1170 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 XAGE2Q96GT9 111 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TMEM87BQ96K49 555 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 BAG1Q99933 345 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 BCL11BQ9C0K0 894 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TSPYL1Q9H0U9 437 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ZBTB3Q9H5J0 574 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 GPHNQ9NQX3 736 aaPredicted RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ZNF446Q9NWS9 450 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ANGEL1Q9UNK9 670 aaKnown RBP4.04□□□□□ -1.76
COL8A1-204ENST00000462604 CEP131Q9UPN4 1083 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 TBC1D2BQ9UPU7 963 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 HPSEQ9Y251 543 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 MEGF6O75095 1541 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 C1orf167Q5SNV9 1468 aa4.04□□□□□ -1.76
COL8A1-204ENST00000462604 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NEDD4P46934 1319 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PCDH11XQ9BZA7 1347 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PCDH11YQ9BZA8 1340 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 A0A0G2JLW4 131 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 ERICH4A6NGS2 130 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NBPF26B4DH59 902 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 CYP27B1O15528 508 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 GPAA1O43292 621 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 WDHD1O75717 1129 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 FGAP02671 866 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 APPP05067 770 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 UQCRFS1P1P0C7P4 283 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 ATP1A3P13637 1013 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 ADORA1P30542 326 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 IARSP41252 1262 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 ZAP70P43403 619 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 GNG11P61952 73 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TUBB4BP68371 445 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PPP2R3AQ06190 1150 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 IFIT5Q13325 482 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PNOCQ13519 176 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TUBB2AQ13885 445 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 SART3Q15020 963 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 HSP90AB3PQ58FF7 597 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TMEM67Q5HYA8 995 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 CT47A1Q5JQC4 288 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 METTL24Q5JXM2 366 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NBPF14Q5TI25 921 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 SPECC1LQ69YQ0 1117 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 KANK3Q6NY19 840 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NBPF10Q6P3W6 841 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 SHC4Q6S5L8 630 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 KRBA2Q6ZNG9 492 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 BARGINQ6ZT62 677 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TTLL7Q6ZT98 887 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PPFIBP1Q86W92 1011 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PROSER2Q86WR7 435 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 MICU3Q86XE3 530 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 RAB11FIP4Q86YS3 637 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NUTM2AQ8IVF1 878 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NOSTRINQ8IVI9 506 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TRIM22Q8IYM9 498 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NBPF15Q8N660 670 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 GPR161Q8N6U8 529 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PDILTQ8N807 584 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TRIML1Q8N9V2 468 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 MLKLQ8NB16 471 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 GOLGA1Q92805 767 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 SMARCE1Q969G3 411 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 ZNF594Q96JF6 807 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 AK7Q96M32 723 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TUBB2BQ9BVA1 445 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 CARD6Q9BX69 1037 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 NAA15Q9BXJ9 866 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 TMX1Q9H3N1 280 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 C19orf44Q9H6X5 657 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 GPBP1L1Q9HC44 474 aaPredicted RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 CWC15Q9P013 229 aaKnown RBP4.03□□□□□ -1.76
COL8A1-204ENST00000462604 RAI14Q9P0K7 980 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 KCNH3Q9ULD8 1083 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 PPP2R2CQ9Y2T4 447 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 FHOD1Q9Y613 1164 aa4.03□□□□□ -1.76
COL8A1-204ENST00000462604 SLC12A7Q9Y666 1083 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms