RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
SCNM1-204ENST00000461862 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
SCNM1-204ENST00000461862 BACH2Q9BYV9 841 aa12.78□□□□□ -0.36
SCNM1-204ENST00000461862 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
SCNM1-204ENST00000461862 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
SCNM1-204ENST00000461862 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
SCNM1-204ENST00000461862 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
SCNM1-204ENST00000461862 ANKRD36CQ5JPF3 1778 aa12.77□□□□□ -0.36
SCNM1-204ENST00000461862 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
SCNM1-204ENST00000461862 ERVK-9P63128 1117 aa12.77□□□□□ -0.37
SCNM1-204ENST00000461862 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
SCNM1-204ENST00000461862 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
SCNM1-204ENST00000461862 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
SCNM1-204ENST00000461862 TBC1D2BQ9UPU7 963 aa12.77□□□□□ -0.37
SCNM1-204ENST00000461862 COL15A1P39059 1388 aa12.77□□□□□ -0.37
SCNM1-204ENST00000461862 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 GRM8O00222 908 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 SCTRP47872 440 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 SIK1P57059 783 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 KRT76Q01546 638 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 MTX1Q13505 466 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
SCNM1-204ENST00000461862 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
SCNM1-204ENST00000461862 APBB1O00213 710 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 A1BGP04217 495 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 IGKV5-2P06315 115 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 SSH3Q8TE77 659 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 LNPKQ9C0E8 428 aa12.75□□□□□ -0.37
SCNM1-204ENST00000461862 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
SCNM1-204ENST00000461862 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
SCNM1-204ENST00000461862 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
SCNM1-204ENST00000461862 MCCD1P59942 119 aaPredicted RBP12.74□□□□□ -0.37
SCNM1-204ENST00000461862 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
SCNM1-204ENST00000461862 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
SCNM1-204ENST00000461862 NANOS1Q8WY41 292 aaKnown RBP12.74□□□□□ -0.37
SCNM1-204ENST00000461862 MYD88Q99836 296 aa12.74□□□□□ -0.37
SCNM1-204ENST00000461862 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 ITGA6P23229 1130 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
SCNM1-204ENST00000461862 GCKRQ14397 625 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 SLC15A2Q16348 729 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 C8orf34Q49A92 452 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
SCNM1-204ENST00000461862 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 RAB11FIP3O75154 756 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 IRF5Q13568 498 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-204ENST00000461862 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
SCNM1-204ENST00000461862 SRCAPQ6ZRS2 3230 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 SRGAP3O43295 1099 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
SCNM1-204ENST00000461862 RNF144AP50876 292 aaPredicted RBP12.71□□□□□ -0.37
SCNM1-204ENST00000461862 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
SCNM1-204ENST00000461862 NUP98P52948 1817 aa12.71□□□□□ -0.38
SCNM1-204ENST00000461862 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
SCNM1-204ENST00000461862 CASZ1Q86V15 1759 aa12.71□□□□□ -0.38
SCNM1-204ENST00000461862 C4BP0C0L5 1744 aa12.71□□□□□ -0.38
SCNM1-204ENST00000461862 MAP3K15Q6ZN16 1313 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 TRIM28Q13263 835 aaKnown RBP12.7□□□□□ -0.38
SCNM1-204ENST00000461862 SLC27A3Q5K4L6 730 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 LYSMD3Q7Z3D4 306 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-204ENST00000461862 ZNF592Q92610 1267 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 LRRCC1Q9C099 1032 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 CWC25Q9NXE8 425 aaPredicted RBP12.7□□□□□ -0.38
SCNM1-204ENST00000461862 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
SCNM1-204ENST00000461862 NOP58Q9Y2X3 529 aaKnown RBP12.7□□□□□ -0.38
SCNM1-204ENST00000461862 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
SCNM1-204ENST00000461862 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
SCNM1-204ENST00000461862 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 OSBPL3Q9H4L5 887 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 EXOC6BQ9Y2D4 811 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
SCNM1-204ENST00000461862 A0A087WZG4 1122 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 A0A1W2PRU2 124 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 FAM181BA6NEQ2 426 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 ERVV-1B6SEH8 477 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 MEN1O00255 615 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 TRAK2O60296 914 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 RABL6Q3YEC7 729 aaPredicted RBP12.68□□□□□ -0.38
SCNM1-204ENST00000461862 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
SCNM1-204ENST00000461862 ERC1Q8IUD2 1116 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
SCNM1-204ENST00000461862 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms