RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 PKP1Q13835 747 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 EZH2Q15910 746 aaKnown RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 RRP12Q5JTH9 1297 aaKnown RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 IFNL3Q8IZI9 196 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 STK11IPQ8N1F8 1099 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 LCORLQ8N3X6 602 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 FAM184AQ8NB25 1140 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 FBXO41Q8TF61 875 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 FBXW7Q969H0 707 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 ZNF622Q969S3 477 aaKnown RBP eCLIP8.02□□□□□ -1.13
MSH2-204ENST00000461394 CHMP4CQ96CF2 233 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 STRBPQ96SI9 672 aaKnown RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 GZF1Q9H116 711 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
MSH2-204ENST00000461394 NRXN2Q9P2S2 1712 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 PRKAB2O43741 272 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 STX6O43752 255 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 PDCP20941 246 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 BAG6P46379 1132 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 LARP1BQ659C4 914 aaKnown RBP8.01□□□□□ -1.13
MSH2-204ENST00000461394 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 CRAMP1Q96RY5 1269 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 BRIP1Q9BX63 1249 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 LAMB1P07942 1786 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 BAZ2AQ9UIF9 1905 aaKnown RBP8.01□□□□□ -1.13
MSH2-204ENST00000461394 PNPLA7Q6ZV29 1317 aa8.01□□□□□ -1.13
MSH2-204ENST00000461394 LRRC37AA6NMS7 1700 aa8□□□□□ -1.13
MSH2-204ENST00000461394 COL11A2P13942 1736 aaPredicted RBP8□□□□□ -1.13
MSH2-204ENST00000461394 GOLGA8BA8MQT2 603 aa8□□□□□ -1.13
MSH2-204ENST00000461394 H3BQV1 296 aa8□□□□□ -1.13
MSH2-204ENST00000461394 RIMBP2O15034 1052 aa8□□□□□ -1.13
MSH2-204ENST00000461394 DTNBO60941 627 aa8□□□□□ -1.13
MSH2-204ENST00000461394 BRD1O95696 1058 aa8□□□□□ -1.13
MSH2-204ENST00000461394 LDHBP07195 334 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 ZSCAN22P10073 491 aaPredicted RBP8□□□□□ -1.13
MSH2-204ENST00000461394 NPR1P16066 1061 aa8□□□□□ -1.13
MSH2-204ENST00000461394 ALDH1B1P30837 517 aa8□□□□□ -1.13
MSH2-204ENST00000461394 FOSBP53539 338 aa8□□□□□ -1.13
MSH2-204ENST00000461394 DYNLL1P63167 89 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 CCT2P78371 535 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 GSTO1P78417 241 aa8□□□□□ -1.13
MSH2-204ENST00000461394 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
MSH2-204ENST00000461394 ALX1Q15699 326 aa8□□□□□ -1.13
MSH2-204ENST00000461394 CRY2Q49AN0 593 aa8□□□□□ -1.13
MSH2-204ENST00000461394 IFFO2Q5TF58 517 aa8□□□□□ -1.13
MSH2-204ENST00000461394 MFSD6Q6ZSS7 791 aa8□□□□□ -1.13
MSH2-204ENST00000461394 TXNRD3Q86VQ6 643 aa8□□□□□ -1.13
MSH2-204ENST00000461394 C2CD5Q86YS7 1000 aa8□□□□□ -1.13
MSH2-204ENST00000461394 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 WDR66Q8TBY9 1149 aa8□□□□□ -1.13
MSH2-204ENST00000461394 GTF3C6Q969F1 213 aa8□□□□□ -1.13
MSH2-204ENST00000461394 DDX11Q96FC9 970 aa8□□□□□ -1.13
MSH2-204ENST00000461394 CRNKL1Q9BZJ0 848 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 KRT23Q9C075 422 aa8□□□□□ -1.13
MSH2-204ENST00000461394 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
MSH2-204ENST00000461394 RGS17Q9UGC6 210 aaPredicted RBP8□□□□□ -1.13
MSH2-204ENST00000461394 KIF3AQ9Y496 699 aa8□□□□□ -1.13
MSH2-204ENST00000461394 ATP6V1DQ9Y5K8 247 aa8□□□□□ -1.13
MSH2-204ENST00000461394 DDX49Q9Y6V7 483 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 DUOX1Q9NRD9 1551 aa8□□□□□ -1.13
MSH2-204ENST00000461394 QSER1Q2KHR3 1735 aa8□□□□□ -1.13
MSH2-204ENST00000461394 TIAM2Q8IVF5 1701 aa8□□□□□ -1.13
MSH2-204ENST00000461394 KIAA1551Q9HCM1 1747 aa8□□□□□ -1.13
MSH2-204ENST00000461394 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
MSH2-204ENST00000461394 MYH2Q9UKX2 1941 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 KLF18A0A0U1RQI7 1052 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 ERICH2A1L162 156 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 GSG1L2A8MUP6 293 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 B4E1Z4 1266 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 CPLX1O14810 134 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 FOXP2O15409 715 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 PFKFB2O60825 505 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 PRPF40AO75400 957 aaKnown RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 LDHCP07864 332 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SYT1P21579 422 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 HOXA10P31260 410 aaPredicted RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 EXOSC10Q01780 885 aaKnown RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 MECOMQ03112 1051 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SLC15A2Q16348 729 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SYNE3Q6ZMZ3 975 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 TBC1D10CQ8IV04 446 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SP8Q8IXZ3 490 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 AMOTL1Q8IY63 956 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 MB21D2Q8IYB1 491 aaPredicted RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 NAV1Q8NEY1 1877 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 SDR42E1Q8WUS8 393 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 MASTLQ96GX5 879 aa7.99□□□□□ -1.13
MSH2-204ENST00000461394 RNF41Q9H4P4 317 aaPredicted RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 GPBP1L1Q9HC44 474 aaPredicted RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 EPB41L4AQ9HCS5 686 aaPredicted RBP7.99□□□□□ -1.13
MSH2-204ENST00000461394 AATFQ9NY61 560 aaKnown RBP eCLIP7.99□□□□□ -1.13
MSH2-204ENST00000461394 ZDHHC9Q9Y397 364 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms