RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 CYP26C1Q6V0L0 522 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 VSIG1Q86XK7 387 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 NOC4LQ9BVI4 516 aaKnown RBP10.06□□□□□ -0.8
BRCA1-205ENST00000461221 PPP1R12CQ9BZL4 782 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 AFG3L2Q9Y4W6 797 aa10.06□□□□□ -0.8
BRCA1-205ENST00000461221 SLC9C2Q5TAH2 1124 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 NSMCE1Q8WV22 266 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 ZKSCAN3Q9BRR0 538 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 TTC41PQ6P2S7 1318 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 AKNAD1Q5T1N1 836 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 CNNM4Q6P4Q7 775 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 ZNF710Q8N1W2 664 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 NLRP3Q96P20 1036 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
BRCA1-205ENST00000461221 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 MBIPQ9NS73 344 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 PDE1AP54750 535 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 PSMD6Q15008 389 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 HAUS8Q9BT25 410 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 PAG1Q9NWQ8 432 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 GOLGA6CA6NDK9 693 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 TRAF5O00463 557 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
BRCA1-205ENST00000461221 RNF113AO15541 343 aaKnown RBP10.05□□□□□ -0.8
BRCA1-205ENST00000461221 GOLGA6DP0CG33 693 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 ERCC3P19447 782 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 MAIP1Q8WWC4 291 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 GOLGA6AQ9NYA3 693 aa10.05□□□□□ -0.8
BRCA1-205ENST00000461221 CCDC170Q8IYT3 715 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 GSDMBQ8TAX9 411 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 RAD50Q92878 1312 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 WASLO00401 505 aaPredicted RBP10.04□□□□□ -0.8
BRCA1-205ENST00000461221 TSHZ3Q63HK5 1081 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 FAM135AQ9P2D6 1515 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 PPFIA2O75334 1257 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 KRT9P35527 623 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 HAUS3Q68CZ6 603 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 CCDC89Q8N998 374 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 ZBTB21Q9ULJ3 1066 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 SUPT6HQ7KZ85 1726 aaKnown RBP10.04□□□□□ -0.8
BRCA1-205ENST00000461221 GABPAQ06546 454 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 CTNND2Q9UQB3 1225 aa10.04□□□□□ -0.8
BRCA1-205ENST00000461221 AQRO60306 1485 aaKnown RBP eCLIP10.03□□□□□ -0.84e-10■■■■■ 36.9
BRCA1-205ENST00000461221 F8W031 263 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 RASSF2P50749 326 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 UTP14CQ5TAP6 766 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 SIRT1Q96EB6 747 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 STRN3Q13033 797 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 RNF10Q8N5U6 811 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 PPANQ9NQ55 473 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
BRCA1-205ENST00000461221 TBC1D8BQ0IIM8 1120 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 ATP8B2P98198 1209 aa10.03□□□□□ -0.8
BRCA1-205ENST00000461221 ANKRD36BQ8N2N9 1353 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 CCT6AP40227 531 aaKnown RBP10.02□□□□□ -0.8
BRCA1-205ENST00000461221 PAK2Q13177 524 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 BRDTQ58F21 947 aaPredicted RBP10.02□□□□□ -0.8
BRCA1-205ENST00000461221 IGSF22Q8N9C0 903 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 SECISBP2LQ93073 1101 aaKnown RBP10.02□□□□□ -0.8
BRCA1-205ENST00000461221 ANKRD2Q9GZV1 360 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 MCM9Q9NXL9 1143 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 CLEC11AQ9Y240 323 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 NCAPD3P42695 1498 aa10.02□□□□□ -0.8
BRCA1-205ENST00000461221 TXNDC9O14530 226 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 PPFIA4O75335 1185 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 ATP2A3Q93084 1043 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 EYA3Q99504 573 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 PARP2Q9UGN5 583 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 GRM8O00222 908 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 XRCC6P12956 609 aaKnown RBP eCLIP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 BIRC2Q13490 618 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 PRR16Q569H4 304 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 GTF3C6Q969F1 213 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 ASIC3Q9UHC3 531 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 DHX32Q7L7V1 743 aaKnown RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-205ENST00000461221 ANKRD44Q8N8A2 993 aa10.02□□□□□ -0.81
BRCA1-205ENST00000461221 P3H4Q92791 437 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms