RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 LARP1Q6PKG0 1096 aaKnown RBP7.54□□□□□ -1.2
PTPN12-209ENST00000460731 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 CFAP53Q96M91 514 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 C8orf37Q96NL8 207 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 ZNF358Q9NW07 568 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 USP21Q9UK80 565 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 RGPD1P0DJD0 1748 aa7.54□□□□□ -1.2
PTPN12-209ENST00000460731 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-209ENST00000460731 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
PTPN12-209ENST00000460731 TRPC5Q9UL62 973 aaPredicted RBP7.53□□□□□ -1.2
PTPN12-209ENST00000460731 PLCH1Q4KWH8 1693 aa7.53□□□□□ -1.2
PTPN12-209ENST00000460731 DISP2A7MBM2 1401 aa7.52□□□□□ -1.2
PTPN12-209ENST00000460731 FAM208AQ9UK61 1670 aaKnown RBP7.52□□□□□ -1.21
PTPN12-209ENST00000460731 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 PPM1GO15355 546 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-209ENST00000460731 LILRB5O75023 590 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 SOX11P35716 441 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 EVA1CP58658 441 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 RAB44Q7Z6P3 723 aaPredicted RBP7.52□□□□□ -1.21
PTPN12-209ENST00000460731 TCP11L2Q8N4U5 519 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPN12-209ENST00000460731 PLEKHF1Q96S99 279 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 QTRT2Q9H974 415 aaKnown RBP7.52□□□□□ -1.21
PTPN12-209ENST00000460731 NUDCQ9Y266 331 aa7.52□□□□□ -1.21
PTPN12-209ENST00000460731 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-209ENST00000460731 RBM6P78332 1123 aaKnown RBP7.51□□□□□ -1.21
PTPN12-209ENST00000460731 WASHC4Q2M389 1173 aa7.51□□□□□ -1.21
PTPN12-209ENST00000460731 SH3PXD2AQ5TCZ1 1133 aa7.51□□□□□ -1.21
PTPN12-209ENST00000460731 MEX3CQ5U5Q3 659 aaKnown RBP7.51□□□□□ -1.21
PTPN12-209ENST00000460731 C1orf53Q5VUE5 145 aa7.51□□□□□ -1.21
PTPN12-209ENST00000460731 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
PTPN12-209ENST00000460731 SLC9A9Q8IVB4 645 aa7.51□□□□□ -1.21
PTPN12-209ENST00000460731 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
PTPN12-209ENST00000460731 GTF2IP78347 998 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 TYRO3Q06418 890 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 TOM1L2Q6ZVM7 507 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 GDPD2Q9HCC8 539 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 BRD7Q9NPI1 651 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 NLRP2Q9NX02 1062 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 GLI3P10071 1580 aa7.5□□□□□ -1.21
PTPN12-209ENST00000460731 RGPD2P0DJD1 1756 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 SERTM1A2A2V5 107 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
PTPN12-209ENST00000460731 IL2RBP14784 551 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 SEMA3FQ13275 785 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
PTPN12-209ENST00000460731 EML3Q32P44 896 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 SULT6B1Q6IMI4 303 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 AEBP1Q8IUX7 1158 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 TP53INP1Q96A56 240 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 LTV1Q96GA3 475 aaPredicted RBP7.49□□□□□ -1.21
PTPN12-209ENST00000460731 MRS2Q9HD23 443 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 NOD1Q9Y239 953 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 BCL9O00512 1426 aa7.49□□□□□ -1.21
PTPN12-209ENST00000460731 OVOS2A0A0G2JMS6 1433 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 U2AF1L5P0DN76 240 aaPredicted RBP7.48□□□□□ -1.21
PTPN12-209ENST00000460731 RXRBP28702 533 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 RAC1P63000 192 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 U2AF1Q01081 240 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPN12-209ENST00000460731 AMOTQ4VCS5 1084 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
PTPN12-209ENST00000460731 RHPN1Q8TCX5 695 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 PNNQ9H307 717 aaKnown RBP7.48□□□□□ -1.21
PTPN12-209ENST00000460731 RNF112Q9ULX5 631 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
PTPN12-209ENST00000460731 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 MEGF6O75095 1541 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
PTPN12-209ENST00000460731 NGEFQ8N5V2 710 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 NFATC2IPQ8NCF5 419 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 RAPGEF4Q8WZA2 1011 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 HSH2DQ96JZ2 352 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 PHACTR3Q96KR7 559 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 ANKIB1Q9P2G1 1089 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 SLC6A14Q9UN76 642 aa7.47□□□□□ -1.21
PTPN12-209ENST00000460731 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
PTPN12-209ENST00000460731 CYP27B1O15528 508 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 HTATSF1O43719 755 aaKnown RBP7.46□□□□□ -1.22
PTPN12-209ENST00000460731 HMOX1P09601 288 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 PRKAR2BP31323 418 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 PLEKHO1Q53GL0 409 aaPredicted RBP7.46□□□□□ -1.22
PTPN12-209ENST00000460731 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 ZNF280CQ8ND82 737 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 ZCRB1Q8TBF4 217 aaKnown RBP7.46□□□□□ -1.22
PTPN12-209ENST00000460731 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
PTPN12-209ENST00000460731 PARP4Q9UKK3 1724 aaKnown RBP7.46□□□□□ -1.22
PTPN12-209ENST00000460731 PKD1L3Q7Z443 1732 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 SFI1A8K8P3 1242 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 EXOC5O00471 708 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 ABL2P42684 1182 aa7.45□□□□□ -1.22
PTPN12-209ENST00000460731 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
PTPN12-209ENST00000460731 MTHFSDQ2M296 383 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms