RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 A0A1W2PQ64 194 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 A0A1W2PQD8 194 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 SSBP05455 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
CPNE6-202ENST00000460657 ARMT1Q9H993 441 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 ADAMTS2O95450 1211 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 SPTY2D1Q68D10 685 aaPredicted RBP13.76□□□□□ -0.21
CPNE6-202ENST00000460657 XPO4Q9C0E2 1151 aaKnown RBP13.76□□□□□ -0.21
CPNE6-202ENST00000460657 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 PFKFB1P16118 471 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
CPNE6-202ENST00000460657 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 BAG1Q99933 345 aaPredicted RBP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 ZSWIM4Q9H7M6 989 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 CMA1P23946 247 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 MCM3P25205 808 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 CDC25BP30305 580 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 SETQ01105 290 aaPredicted RBP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 PUS3Q9BZE2 481 aaKnown RBP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 ZHX3Q9H4I2 956 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 ARFGAP3Q9NP61 516 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 U2AF2P26368 475 aaKnown RBP eCLIP13.75□□□□□ -0.21
CPNE6-202ENST00000460657 MYL10Q9BUA6 226 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 RAB34Q9BZG1 259 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
CPNE6-202ENST00000460657 LDHCP07864 332 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 TICAM2Q86XR7 235 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 KAT6BQ8WYB5 2073 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 CALCOCO1Q9P1Z2 691 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 SPATA31D1Q6ZQQ2 1576 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 BAG3O95817 575 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 STAT6P42226 847 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 MTIF2P46199 727 aaKnown RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 CDR1P51861 262 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 NDUFA8P51970 172 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 STX17P56962 302 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 AMPD3Q01432 767 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 CALML3P27482 149 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 GNAQP50148 359 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 RBM6P78332 1123 aaKnown RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 TRIM47Q96LD4 638 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 IL25Q9H293 177 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 RBM28Q9NW13 759 aaKnown RBP13.74□□□□□ -0.21
CPNE6-202ENST00000460657 TCEAL9Q9UHQ7 104 aa13.74□□□□□ -0.21
CPNE6-202ENST00000460657 MYO1BO43795 1136 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 ADD1P35611 737 aaKnown RBP13.73□□□□□ -0.21
CPNE6-202ENST00000460657 SPATA5Q8NB90 893 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
CPNE6-202ENST00000460657 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 MROH5Q6ZUA9 1318 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 POLR2DO15514 142 aaKnown RBP13.73□□□□□ -0.21
CPNE6-202ENST00000460657 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 IQUBQ8NA54 791 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 CTSWP56202 376 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
CPNE6-202ENST00000460657 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 SALL3Q9BXA9 1300 aa13.73□□□□□ -0.21
CPNE6-202ENST00000460657 USO1O60763 962 aaKnown RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 ADORA1P30542 326 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 CCDC178Q5BJE1 867 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 CALML4Q96GE6 196 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 H7C1W4 665 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 C11orf57Q6ZUT1 292 aaPredicted RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 GOLGA1Q92805 767 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 TSG101Q99816 390 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 M0R2C6 588 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 PDE6AP16499 860 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 STX8Q9UNK0 236 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 AKR1B15C9JRZ8 316 aaPredicted RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 ARHGAP6O43182 974 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 KARSQ15046 597 aaKnown RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
CPNE6-202ENST00000460657 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
CPNE6-202ENST00000460657 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.21
CPNE6-202ENST00000460657 IFT172Q9UG01 1749 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms