RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 LDHCP07864 332 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 NT5C2P49902 561 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 DPY19L2Q6NUT2 758 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 GIMAP6Q6P9H5 292 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 DZIP1Q86YF9 867 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 NSUN4Q96CB9 384 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 PUS7LQ9H0K6 701 aaKnown RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 PIM2Q9P1W9 311 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 IQSEC3Q9UPP2 1182 aaPredicted RBP10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 SNX14Q9Y5W7 946 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 CACNA1SQ13698 1873 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 CCDC88AQ3V6T2 1871 aa10.63□□□□□ -0.71
CDC42EP3-204ENST00000457889 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 G3V3G9 751 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 DPEP1P16444 411 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 CYP7A1P22680 504 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 KIAA2012Q0VF49 1180 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 TBC1D2Q9BYX2 928 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 CYP46A1Q9Y6A2 500 aa10.62□□□□□ -0.71
CDC42EP3-204ENST00000457889 MAGEB6P1A0A0J9YX57 407 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 PATL2C9JE40 543 aaKnown RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 K7ELQ4 463 aaPredicted RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 MBD4O95243 580 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 BAG3O95817 575 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 KCNA3P22001 575 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 NEK4P51957 841 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 MECOMQ03112 1051 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 DALRD3Q5D0E6 543 aaKnown RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 VPS53Q5VIR6 699 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 CCDC129Q6ZRS4 1044 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 NOL10Q9BSC4 688 aaKnown RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 ALDH8A1Q9H2A2 487 aaPredicted RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 SPON1Q9HCB6 807 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 MYO5AQ9Y4I1 1855 aaKnown RBP10.61□□□□□ -0.71
CDC42EP3-204ENST00000457889 BRCA1P38398 1863 aaKnown RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 CYP21A2P08686 494 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 CHRM1P11229 460 aaPredicted RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 PCP11498 1178 aaKnown RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 PRDX5P30044 214 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 PTGER2P43116 358 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 PPP4CP60510 307 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 MFSD14BQ5SR56 506 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 STRIP1Q5VSL9 837 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 BLOC1S2Q6QNY1 142 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 RUFY3Q7L099 469 aa10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
CDC42EP3-204ENST00000457889 WDR19Q8NEZ3 1342 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 MYO3BQ8WXR4 1341 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 LTBP3Q9NS15 1303 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 LAMA4Q16363 1823 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 A0A0G2JLW4 131 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 ZNF213O14771 459 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 FOXP2O15409 715 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 C21orf2O43822 256 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 FGAP02671 866 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 CHGBP05060 677 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 CASTP20810 708 aaKnown RBP10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 HDLBPQ00341 1268 aaKnown RBP10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 MRIQ9BWK5 157 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 NAPBQ9H115 298 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 ATP8A2Q9NTI2 1148 aa10.59□□□□□ -0.71
CDC42EP3-204ENST00000457889 MROH7-TTC4A0A0A0MT08 1334 aa10.58□□□□□ -0.71
CDC42EP3-204ENST00000457889 GAKO14976 1311 aa10.58□□□□□ -0.71
CDC42EP3-204ENST00000457889 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 PPIP5K2O43314 1243 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 ECE2O60344 883 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 APPP05067 770 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 MMP14P50281 582 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 GTF2IP78347 998 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 SLFNL1Q499Z3 407 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 LCORLQ8N3X6 602 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 FBXL16Q8N461 479 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 CHMP4CQ96CF2 233 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 ZSCAN31Q96LW9 406 aaPredicted RBP10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 TTC14Q96N46 770 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 NEK1Q96PY6 1258 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 RNF41Q9H4P4 317 aaPredicted RBP10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 CNNM2Q9H8M5 875 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 ARMT1Q9H993 441 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 SH2B1Q9NRF2 756 aaPredicted RBP10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 SLC4A4Q9Y6R1 1079 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
CDC42EP3-204ENST00000457889 GPR75-ASB3A0A0A6YYF3 556 aa10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
CDC42EP3-204ENST00000457889 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms