RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 LAMC3Q9Y6N6 1575 aa11.36□□□□□ -0.59
SCN5A-210ENST00000455624 RXRAP19793 462 aa11.36□□□□□ -0.59
SCN5A-210ENST00000455624 SETDB1Q15047 1291 aa11.36□□□□□ -0.59
SCN5A-210ENST00000455624 ERCC6LQ2NKX8 1250 aa11.36□□□□□ -0.59
SCN5A-210ENST00000455624 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 ITIH3Q06033 890 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 ARHGAP45Q92619 1136 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 GRIN2AQ12879 1464 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 ZBED4O75132 1171 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 ERCC5P28715 1186 aaPredicted RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 CALCOCO2Q13137 446 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 CUL4BQ13620 913 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 RUFY3Q7L099 469 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 NACA2Q9H009 215 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 HELLSQ9NRZ9 838 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 HAUS2Q9NVX0 235 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 DNM1Q05193 864 aaKnown RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 LETM2Q2VYF4 491 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 GPR161Q8N6U8 529 aaKnown RBP11.35□□□□□ -0.59
SCN5A-210ENST00000455624 CNBD1Q8NA66 436 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 MAST3O60307 1309 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 INF2Q27J81 1249 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 BRAPQ7Z569 592 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 PPP1R9BQ96SB3 815 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
SCN5A-210ENST00000455624 HDAC1Q13547 482 aaPredicted RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 AFAP1L2Q8N4X5 818 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 CCDC26Q8TAB7 109 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 CACYBPQ9HB71 228 aaKnown RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 MBD4O95243 580 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 NSMCE1Q8WV22 266 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 MNAT1P51948 309 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 VAV2P52735 878 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 NOC4LQ9BVI4 516 aaKnown RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 SATB1Q01826 763 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 NFATC2IPQ8NCF5 419 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 DACT1Q9NYF0 836 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 PLCD1P51178 756 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 VWA3BQ502W6 1294 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 FYB2Q5VWT5 728 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 KRT222Q8N1A0 295 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 GABPB2Q8TAK5 448 aaPredicted RBP11.34□□□□□ -0.59
SCN5A-210ENST00000455624 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
SCN5A-210ENST00000455624 DKC1O60832 514 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN5A-210ENST00000455624 MCM6Q14566 821 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 LZTFL1Q9NQ48 299 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 SPOPO43791 374 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 TBC1D32Q96NH3 1257 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 CLUL1Q15846 466 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 CEP85LQ5SZL2 805 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 CCDC186Q7Z3E2 898 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 ELP1O95163 1332 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 TUBB4AP04350 444 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.6
SCN5A-210ENST00000455624 HAUS3Q68CZ6 603 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 CCDC110Q8TBZ0 833 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 VPS18Q9P253 973 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 DUOX2Q9NRD8 1548 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
SCN5A-210ENST00000455624 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 INTS8Q75QN2 995 aaKnown RBP11.32□□□□□ -0.6
SCN5A-210ENST00000455624 CPLX4Q7Z7G2 160 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 FBLN1P23142 703 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 PPP1R2P41236 205 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 PDE4DQ08499 809 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 MTHFSDQ2M296 383 aaKnown RBP11.32□□□□□ -0.6
SCN5A-210ENST00000455624 TBC1D31Q96DN5 1066 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 AZI2Q9H6S1 392 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
SCN5A-210ENST00000455624 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
SCN5A-210ENST00000455624 TRAF5O00463 557 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
SCN5A-210ENST00000455624 ANKRD44Q8N8A2 993 aa11.32□□□□□ -0.6
SCN5A-210ENST00000455624 NKIRAS1Q9NYS0 192 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms