RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 MICALL2Q8IY33 904 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 ARMT1Q9H993 441 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 GLTPD2A6NH11 291 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 REC8O95072 547 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 RHBDL3P58872 404 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 ZBED3Q96IU2 234 aaPredicted RBP19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 NOL10Q9BSC4 688 aaKnown RBP19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 GPRC5DQ9NZD1 345 aa19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 CNOT7Q9UIV1 285 aaKnown RBP19.91■□□□□ 0.78
CCDC90B-202ENST00000455220 PLCG2P16885 1265 aa19.9■□□□□ 0.78
CCDC90B-202ENST00000455220 GNAT2P19087 354 aa19.9■□□□□ 0.78
CCDC90B-202ENST00000455220 LSG1Q9H089 658 aaKnown RBP19.9■□□□□ 0.78
CCDC90B-202ENST00000455220 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
CCDC90B-202ENST00000455220 PCDHAC2Q9Y5I4 1007 aa19.9■□□□□ 0.78
CCDC90B-202ENST00000455220 SPDYE2BA6NHP3 402 aa19.89■□□□□ 0.77
CCDC90B-202ENST00000455220 FOXP2O15409 715 aa19.89■□□□□ 0.77
CCDC90B-202ENST00000455220 EPB41L2O43491 1005 aaKnown RBP19.89■□□□□ 0.77
CCDC90B-202ENST00000455220 SPDYE6P0CI01 402 aa19.89■□□□□ 0.77
CCDC90B-202ENST00000455220 ANO2Q9NQ90 1003 aa19.89■□□□□ 0.77
CCDC90B-202ENST00000455220 RPAP1Q9BWH6 1393 aaPredicted RBP19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 CDK5RAP2Q96SN8 1893 aa19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 HSPD1P10809 573 aaKnown RBP19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 RBM5P52756 815 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 DLGAP5Q15398 846 aa19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 VPS53Q5VIR6 699 aa19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 SH3RF3Q8TEJ3 882 aaPredicted RBP19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 DSCC1Q9BVC3 393 aa19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 ECM29Q5VYK3 1845 aa19.88■□□□□ 0.77
CCDC90B-202ENST00000455220 PTH1RQ03431 593 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 CDC42EP5Q6NZY7 148 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 KIAA1211Q6ZU35 1233 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 PRMT6Q96LA8 375 aaPredicted RBP19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 FOCADQ5VW36 1801 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 WDR90Q96KV7 1748 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 PATL2C9JE40 543 aaKnown RBP19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 H7C1D1 291 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 PRKAB2O43741 272 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 MAP4K1Q92918 833 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 SLC4A4Q9Y6R1 1079 aa19.87■□□□□ 0.77
CCDC90B-202ENST00000455220 GSG1L2A8MUP6 293 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 WNT10BO00744 389 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 EGFRP00533 1210 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 EPS15P42566 896 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 TEX11Q8IYF3 940 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 USP40Q9NVE5 1235 aa19.86■□□□□ 0.77
CCDC90B-202ENST00000455220 SCN4AP35499 1836 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 LMOD1P29536 600 aaPredicted RBP19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 ALX1Q15699 326 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 SAMD7Q7Z3H4 446 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 USP26Q9BXU7 913 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 EPB41L4AQ9HCS5 686 aaPredicted RBP19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 MKRN1Q9UHC7 482 aaKnown RBP19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 ZMYM6O95789 1325 aa19.85■□□□□ 0.77
CCDC90B-202ENST00000455220 WDHD1O75717 1129 aaPredicted RBP19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 KIF4BQ2VIQ3 1234 aa19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 SDR42E1Q8WUS8 393 aa19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 IDI2Q9BXS1 227 aa19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 ATP8A2Q9NTI2 1148 aa19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 DDX60LQ5H9U9 1706 aaKnown RBP19.84■□□□□ 0.77
CCDC90B-202ENST00000455220 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 SPDYE2Q495Y8 402 aa19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 IFNL3Q8IZI9 196 aa19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 TDRD3Q9H7E2 651 aaKnown RBP19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 DCP1AQ9NPI6 582 aaPredicted RBP19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 ADARB2Q9NS39 739 aaKnown RBP19.83■□□□□ 0.77
CCDC90B-202ENST00000455220 NBPF9Q3BBW0 867 aa19.83■□□□□ 0.76
CCDC90B-202ENST00000455220 TRPM4Q8TD43 1214 aa19.83■□□□□ 0.76
CCDC90B-202ENST00000455220 TGFBRAP1Q8WUH2 860 aa19.83■□□□□ 0.76
CCDC90B-202ENST00000455220 NACAP1Q9BZK3 213 aa19.83■□□□□ 0.76
CCDC90B-202ENST00000455220 U3KPZ7 1027 aaPredicted RBP19.83■□□□□ 0.76
CCDC90B-202ENST00000455220 NAV1Q8NEY1 1877 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 MYO1BO43795 1136 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 FGAP02671 866 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 APPP05067 770 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 FLT1P17948 1338 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 USP5P45974 858 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 ZNF70Q9UC06 446 aaPredicted RBP19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 HACL1Q9UJ83 578 aa19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 RBM8AQ9Y5S9 174 aaKnown RBP19.82■□□□□ 0.76
CCDC90B-202ENST00000455220 BAZ2AQ9UIF9 1905 aaKnown RBP19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 IQCA1LA6NCM1 817 aa19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 POTECB2RU33 542 aa19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 NFIAQ12857 509 aa19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 RBM26Q5T8P6 1007 aaKnown RBP19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 FKBP1CQ5VVH2 108 aa19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 DDX4Q9NQI0 724 aaKnown RBP19.81■□□□□ 0.76
CCDC90B-202ENST00000455220 HSPA4P34932 840 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 HIRAP54198 1017 aaPredicted RBP19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 NECTIN1Q15223 517 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 MAPKAPK5Q8IW41 473 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 NAPBQ9H115 298 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 TMOD2Q9NZR1 351 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 CTNNA3Q9UI47 895 aa19.8■□□□□ 0.76
CCDC90B-202ENST00000455220 LAMA4Q16363 1823 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms