RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 PNKPQ96T60 521 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 SH3GL2Q99962 352 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 SUDS3Q9H7L9 328 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 KAT14Q9H8E8 782 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TTF2Q9UNY4 1162 aaKnown RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TARBP1Q13395 1621 aaKnown RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 LRRIQ3A6PVS8 624 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 ELL2O00472 640 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 GLRX3O76003 335 aaKnown RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 RPS6KA3P51812 740 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TMEM139Q8IV31 216 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC47Q96A33 483 aaKnown RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 NAPGQ99747 312 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 C14orf93Q9H972 538 aaKnown RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 ADCY9O60503 1353 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 ZC3H13Q5T200 1668 aaKnown RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 ME1P48163 572 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 INHBEP58166 350 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 GNGT1P63211 74 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 CKAP4Q07065 602 aaKnown RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 NAA25Q14CX7 972 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 NCAPHQ15003 741 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 EMC10Q5UCC4 262 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 SPECC1LQ69YQ0 1117 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 SDCCAG8Q86SQ7 713 aaPredicted RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 DRAXINQ8NBI3 349 aaPredicted RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 KCNG4Q8TDN1 519 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 MICAL1Q8TDZ2 1067 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC51Q96ER9 411 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 CLIC6Q96NY7 704 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 MOV10L1Q9BXT6 1211 aaKnown RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 SLC24A3Q9HC58 644 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 CD248Q9HCU0 757 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 PUF60Q9UHX1 559 aaKnown RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 USP42Q9H9J4 1324 aaKnown RBP9.51□□□□□ -0.89
SMCO1-202ENST00000452776 ATP10BO94823 1461 aa9.51□□□□□ -0.89
SMCO1-202ENST00000452776 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 CHD2O14647 1828 aaKnown RBP9.5□□□□□ -0.89
SMCO1-202ENST00000452776 GOLGA6BA6NDN3 693 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 FANCGO15287 622 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 AHCYL1O43865 530 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 ABCA8O94911 1581 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 CCNHP51946 323 aaPredicted RBP9.5□□□□□ -0.89
SMCO1-202ENST00000452776 USP14P54578 494 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 LMNB2Q03252 620 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
SMCO1-202ENST00000452776 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 CRELD2Q6UXH1 353 aaPredicted RBP9.5□□□□□ -0.89
SMCO1-202ENST00000452776 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC170Q8IYT3 715 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 ANKRD27Q96NW4 1050 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 CHCHD3Q9NX63 227 aaKnown RBP9.5□□□□□ -0.89
SMCO1-202ENST00000452776 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 PREX2Q70Z35 1606 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 KDRP35968 1356 aa9.5□□□□□ -0.89
SMCO1-202ENST00000452776 ERICH2A1L162 156 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 MYO1FO00160 1098 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 RHOXF2BP0C7M4 288 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 RPS6KB1P23443 525 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ST3GAL1Q11201 340 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 SETDB1Q15047 1291 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ARMC9Q7Z3E5 817 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 MFN1Q8IWA4 741 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ELOA2Q8IYF1 753 aaPredicted RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 C1orf131Q8NDD1 294 aaKnown RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC114Q96M63 670 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 RHOXF2Q9BQY4 288 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 RTEL1Q9NZ71 1219 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 DDX20Q9UHI6 824 aaKnown RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 HOOK1Q9UJC3 728 aaKnown RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 TUBGCP6Q96RT7 1819 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 AKR1B15C9JRZ8 316 aaPredicted RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 SASH1O94885 1247 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 FESP07332 822 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 MAGEA8P43361 318 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 MTA1Q13330 715 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 CREB3L3Q68CJ9 461 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 CCDC121Q6ZUS5 278 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 HDGFL2Q7Z4V5 671 aaPredicted RBP9.49□□□□□ -0.89
SMCO1-202ENST00000452776 CEP57Q86XR8 500 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 MAP4K1Q92918 833 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 EPN3Q9H201 632 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 PLEKHA4Q9H4M7 779 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 SLC40A1Q9NP59 571 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 IRAK4Q9NWZ3 460 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 ANAPC4Q9UJX5 808 aa9.49□□□□□ -0.89
SMCO1-202ENST00000452776 GOLGA6L10A6NI86 522 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 CHL1O00533 1208 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 FYB1O15117 783 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 PPFIA2O75334 1257 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 YEATS4O95619 227 aa9.48□□□□□ -0.89
SMCO1-202ENST00000452776 GGCXP38435 758 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms