RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 ZNF765Q7L2R6 523 aa4.87□□□□□ -1.63
LRCH3-209ENST00000452660 DYMQ7RTS9 669 aa4.87□□□□□ -1.63
LRCH3-209ENST00000452660 SHISA5Q8N114 240 aa4.87□□□□□ -1.63
LRCH3-209ENST00000452660 CCDC82Q8N4S0 544 aa4.87□□□□□ -1.63
LRCH3-209ENST00000452660 WDR18Q9BV38 432 aa4.87□□□□□ -1.63
LRCH3-209ENST00000452660 ABL1P00519 1130 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 XRCC5P13010 732 aaKnown RBP4.86□□□□□ -1.63
LRCH3-209ENST00000452660 KIF4BQ2VIQ3 1234 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 ATG4DQ86TL0 474 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-209ENST00000452660 BCL7CQ8WUZ0 217 aaPredicted RBP4.86□□□□□ -1.63
LRCH3-209ENST00000452660 ALKBH8Q96BT7 664 aaKnown RBP4.86□□□□□ -1.63
LRCH3-209ENST00000452660 EHD4Q9H223 541 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 ABCB6Q9NP58 842 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 CRIM1Q9NZV1 1036 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 VAV3Q9UKW4 847 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 AP4E1Q9UPM8 1137 aa4.86□□□□□ -1.63
LRCH3-209ENST00000452660 TMPRSS2O15393 492 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 POLR3DP05423 398 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-209ENST00000452660 RAB6AP20340 208 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 JAG1P78504 1218 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 ARHGAP4P98171 946 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 PDE4CQ08493 712 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 ZNF211Q13398 564 aaPredicted RBP4.85□□□□□ -1.63
LRCH3-209ENST00000452660 GLYCTKQ8IVS8 523 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 DMRTB1Q96MA1 342 aa4.85□□□□□ -1.63
LRCH3-209ENST00000452660 TMEM238LA0A1B0GVL6 79 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 FUT4P22083 530 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 ID3Q02535 119 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 PRKCQQ04759 706 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 WFDC3Q8IUB2 231 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 PPP4R2Q9NY27 417 aa4.84□□□□□ -1.63
LRCH3-209ENST00000452660 ARID3CA6NKF2 412 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 PAPLNO95428 1278 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 IGHA2P01877 340 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 C8AP07357 584 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 PPP2R3AQ06190 1150 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 PDE3AQ14432 1141 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 SCARA3Q6AZY7 606 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 BHLHE22Q8NFJ8 381 aaPredicted RBP4.83□□□□□ -1.64
LRCH3-209ENST00000452660 CCDC74AQ96AQ1 378 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 FANCD2OSQ96PS1 177 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 RBCK1Q9BYM8 510 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 LRRC4CQ9HCJ2 640 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 NPHS2Q9NP85 383 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 PPP1R9AQ9ULJ8 1098 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 DAGLAQ9Y4D2 1042 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 PCDHGC5Q9Y5F6 944 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 SNX11Q9Y5W9 270 aa4.83□□□□□ -1.64
LRCH3-209ENST00000452660 TMEM265A0A087WTH1 108 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 H3BRB1 525 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 ECEL1O95672 775 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 GSTP1P09211 210 aaKnown RBP4.82□□□□□ -1.64
LRCH3-209ENST00000452660 PLCL1Q15111 1095 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 IFI16Q16666 785 aaKnown RBP4.82□□□□□ -1.64
LRCH3-209ENST00000452660 ZNF792Q3KQV3 632 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 USPL1Q5W0Q7 1092 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 SMYD4Q8IYR2 804 aaPredicted RBP4.82□□□□□ -1.64
LRCH3-209ENST00000452660 GLIS3Q8NEA6 775 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 TMEM40Q8WWA1 233 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 TUT1Q9H6E5 874 aaKnown RBP4.82□□□□□ -1.64
LRCH3-209ENST00000452660 PIDD1Q9HB75 910 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 PCOLCE2Q9UKZ9 415 aa4.82□□□□□ -1.64
LRCH3-209ENST00000452660 EIF1AYO14602 144 aaKnown RBP4.81□□□□□ -1.64
LRCH3-209ENST00000452660 DYNC1LI2O43237 492 aaPredicted RBP4.81□□□□□ -1.64
LRCH3-209ENST00000452660 ZNF862O60290 1169 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 EMILIN2Q9BXX0 1053 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 CCDC86Q9H6F5 360 aaKnown RBP4.81□□□□□ -1.64
LRCH3-209ENST00000452660 ANO2Q9NQ90 1003 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 DISC1Q9NRI5 854 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 TMEM39AQ9NV64 488 aa4.81□□□□□ -1.64
LRCH3-209ENST00000452660 FAM87AP0C7U9 286 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 ERVK-24P63145 666 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 ORC1Q13415 861 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 GRM2Q14416 872 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 SPRED2Q7Z698 418 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 PDZD3Q86UT5 571 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 ANKRD24Q8TF21 1146 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 CSRNP1Q96S65 589 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 TNKS2Q9H2K2 1166 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 CACNA2D2Q9NY47 1150 aa4.8□□□□□ -1.64
LRCH3-209ENST00000452660 IGF2BP3O00425 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
LRCH3-209ENST00000452660 GPR182O15218 404 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 GADD45BO75293 160 aaPredicted RBP4.79□□□□□ -1.64
LRCH3-209ENST00000452660 FARP2O94887 1054 aaPredicted RBP4.79□□□□□ -1.64
LRCH3-209ENST00000452660 CEACAM5P06731 702 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 FAAP100Q0VG06 881 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 RNF214Q8ND24 703 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 HRASLS5Q96KN8 279 aa4.79□□□□□ -1.64
LRCH3-209ENST00000452660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.79□□□□□ -1.64
LRCH3-209ENST00000452660 CD8BP10966 210 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 LIG1P18858 919 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 SERPINB4P48594 390 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 OXCT1P55809 520 aa4.78□□□□□ -1.64
LRCH3-209ENST00000452660 ZC3H12AQ5D1E8 599 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms