RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 DDX11L8A8MPP1 907 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 PRDX5P30044 214 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 SLC35G1Q2M3R5 365 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 SETDB2Q96T68 719 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 CNPY2Q9Y2B0 182 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 ADAMTS3O15072 1205 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 RBM6P78332 1123 aaKnown RBP7.84□□□□□ -1.15
USP46-202ENST00000451218 TRAPPC3LQ5T215 181 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 ANKRD18AQ8IVF6 992 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 BRF1Q92994 677 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 ZNF274Q96GC6 653 aaPredicted RBP7.84□□□□□ -1.15
USP46-202ENST00000451218 NYXQ9GZU5 481 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 GDPD2Q9HCC8 539 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 LOC285556D6RIA3 1793 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 HAND2P61296 217 aa7.84□□□□□ -1.15
USP46-202ENST00000451218 DYNLL1P63167 89 aaKnown RBP7.84□□□□□ -1.15
USP46-202ENST00000451218 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 MBD4O95243 580 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 MECOMQ03112 1051 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 TTF1Q15361 905 aaPredicted RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 MCTP1Q6DN14 999 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 FAM173BQ6P4H8 233 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 KIAA1211Q6ZU35 1233 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 SGMS1Q86VZ5 419 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 ZSCAN31Q96LW9 406 aaPredicted RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 PHIPQ8WWQ0 1821 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 NOVP48745 357 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 PGBD1Q96JS3 809 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 GJB4Q9NTQ9 266 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 KIF28PB7ZC32 967 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 KRT32Q14532 448 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 NPY5RQ15761 445 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 ZSCAN23Q3MJ62 389 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 TTC6Q86TZ1 520 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 NBPF5PQ86XG9 351 aaPredicted RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 CDC5LQ99459 802 aaKnown RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 ZSWIM5Q9P217 1185 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 IQSEC3Q9UPP2 1182 aaPredicted RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 STK24Q9Y6E0 443 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 CTDSPL2Q05D32 466 aa7.83□□□□□ -1.16
USP46-202ENST00000451218 RTFDC1Q9BY42 306 aaPredicted RBP7.83□□□□□ -1.16
USP46-202ENST00000451218 SERPINB2P05120 415 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 SRGNP10124 158 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 IGHMBP2P38935 993 aaKnown RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 RBM43Q6ZSC3 357 aaKnown RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 FTOQ9C0B1 505 aaKnown RBP eCLIP7.82□□□□□ -1.16
USP46-202ENST00000451218 TFCP2L1Q9NZI6 479 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 PSMA5P28066 241 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 CTR9Q6PD62 1173 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 CERS5Q8N5B7 392 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 SDR42E1Q8WUS8 393 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 CYP2D7A0A087X1C5 515 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 ZKSCAN1P17029 563 aaPredicted RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 MPHOSPH8Q99549 860 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 SEMA3EO15041 775 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 MEX3CQ5U5Q3 659 aaKnown RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 RCSD1Q6JBY9 416 aa7.82□□□□□ -1.16
USP46-202ENST00000451218 LLPHQ9BRT6 129 aaKnown RBP7.82□□□□□ -1.16
USP46-202ENST00000451218 ELP1O95163 1332 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 DICER1Q9UPY3 1922 aaKnown RBP7.81□□□□□ -1.16
USP46-202ENST00000451218 RHBDL3P58872 404 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 TAF7LQ5H9L4 462 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 GAKO14976 1311 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 ZPR1O75312 459 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 KCNA3P22001 575 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 WDR33Q9C0J8 1336 aaKnown RBP7.81□□□□□ -1.16
USP46-202ENST00000451218 SBF1O95248 1867 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 PRC1O43663 620 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
USP46-202ENST00000451218 RFC4P35249 363 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 STK3Q13188 491 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
USP46-202ENST00000451218 APOA5Q6Q788 366 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 MIGA1Q8NAN2 632 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 RGS22Q8NE09 1264 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 FOXD4L4Q8WXT5 416 aaPredicted RBP7.81□□□□□ -1.16
USP46-202ENST00000451218 AIFM3Q96NN9 605 aa7.81□□□□□ -1.16
USP46-202ENST00000451218 PTPDC1A2A3K4 754 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 AP5Z1O43299 807 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 PRPF40AO75400 957 aaKnown RBP7.8□□□□□ -1.16
USP46-202ENST00000451218 HMGB1P09429 215 aaKnown RBP7.8□□□□□ -1.16
USP46-202ENST00000451218 GUCY1A2P33402 732 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 CNBD1Q8NA66 436 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 TBC1D16Q8TBP0 767 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 NLRP3Q96P20 1036 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 CRAMP1Q96RY5 1269 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 BRIP1Q9BX63 1249 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 SNW1Q13573 536 aaKnown RBP7.8□□□□□ -1.16
USP46-202ENST00000451218 ANKRD1Q15327 319 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 DDX11Q96FC9 970 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 DCP1AQ9NPI6 582 aaPredicted RBP7.8□□□□□ -1.16
USP46-202ENST00000451218 RLFQ13129 1914 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 B4E1Z4 1266 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 IL17RBQ9NRM6 502 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms