RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 HOOK2Q96ED9 719 aa33.7■■■□□ 2.99
USP42-204ENST00000451154 SNCAIPQ9Y6H5 919 aa33.7■■■□□ 2.99
USP42-204ENST00000451154 SRGAP3O43295 1099 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 TCP10Q12799 353 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 CCDC102BQ68D86 513 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 FAM151AQ8WW52 585 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 ERO1AQ96HE7 468 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 TNNQ9UQP3 1299 aa33.69■■■□□ 2.98
USP42-204ENST00000451154 SPDYE5A6NIY4 337 aa33.68■■■□□ 2.98
USP42-204ENST00000451154 BCAR3O75815 825 aa33.68■■■□□ 2.98
USP42-204ENST00000451154 AK9Q5TCS8 1911 aa33.68■■■□□ 2.98
USP42-204ENST00000451154 HTTP42858 3142 aa33.68■■■□□ 2.98
USP42-204ENST00000451154 SEMA3EO15041 775 aa33.67■■■□□ 2.98
USP42-204ENST00000451154 IPO8O15397 1037 aaKnown RBP33.67■■■□□ 2.98
USP42-204ENST00000451154 SP3Q02447 781 aa33.67■■■□□ 2.98
USP42-204ENST00000451154 DCAF15Q66K64 600 aa33.67■■■□□ 2.98
USP42-204ENST00000451154 FRAT1Q92837 279 aaPredicted RBP33.67■■■□□ 2.98
USP42-204ENST00000451154 USP40Q9NVE5 1235 aa33.67■■■□□ 2.98
USP42-204ENST00000451154 NFIAQ12857 509 aa33.66■■■□□ 2.98
USP42-204ENST00000451154 ERO1BQ86YB8 467 aa33.66■■■□□ 2.98
USP42-204ENST00000451154 SALL1Q9NSC2 1324 aa33.66■■■□□ 2.98
USP42-204ENST00000451154 TRIM27P14373 513 aa33.65■■■□□ 2.98
USP42-204ENST00000451154 TFCP2Q12800 502 aa33.65■■■□□ 2.98
USP42-204ENST00000451154 TAF1CQ15572 869 aaPredicted RBP33.65■■■□□ 2.98
USP42-204ENST00000451154 FAM43AQ8N2R8 423 aa33.65■■■□□ 2.98
USP42-204ENST00000451154 ZNF341Q9BYN7 854 aa33.65■■■□□ 2.98
USP42-204ENST00000451154 CAP1Q01518 475 aa33.64■■■□□ 2.98
USP42-204ENST00000451154 CENPFP49454 3210 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 RPAP1Q9BWH6 1393 aaPredicted RBP33.63■■■□□ 2.97
USP42-204ENST00000451154 IRF6O14896 467 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 INPP5BP32019 993 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 ATF7IPQ6VMQ6 1270 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 CLUAP1Q96AJ1 413 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 EFCC1Q9HA90 598 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 ZFYVE28Q9HCC9 887 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 FAM198AQ9UFP1 575 aa33.63■■■□□ 2.97
USP42-204ENST00000451154 MTX1Q13505 466 aa33.62■■■□□ 2.97
USP42-204ENST00000451154 RASGRF1Q13972 1273 aa33.62■■■□□ 2.97
USP42-204ENST00000451154 ZFPM1Q8IX07 1006 aa33.62■■■□□ 2.97
USP42-204ENST00000451154 XAGE2Q96GT9 111 aa33.62■■■□□ 2.97
USP42-204ENST00000451154 PTPN22Q9Y2R2 807 aa33.62■■■□□ 2.97
USP42-204ENST00000451154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.62■■■□□ 2.97
USP42-204ENST00000451154 A0A1B0GUL7 405 aa33.61■■■□□ 2.97
USP42-204ENST00000451154 CETPP11597 493 aa33.61■■■□□ 2.97
USP42-204ENST00000451154 ABCF2Q9UG63 623 aa33.61■■■□□ 2.97
USP42-204ENST00000451154 AKAP2Q9Y2D5 859 aa33.61■■■□□ 2.97
USP42-204ENST00000451154 MYH2Q9UKX2 1941 aa33.61■■■□□ 2.97
USP42-204ENST00000451154 PPIL2Q13356 520 aa33.6■■■□□ 2.97
USP42-204ENST00000451154 SNAPC2Q13487 334 aa33.6■■■□□ 2.97
USP42-204ENST00000451154 ZGPATQ8N5A5 531 aaKnown RBP33.6■■■□□ 2.97
USP42-204ENST00000451154 BTBD19C9JJ37 291 aa33.59■■■□□ 2.97
USP42-204ENST00000451154 ZBTB22O15209 634 aa33.59■■■□□ 2.97
USP42-204ENST00000451154 GNAI2P04899 355 aa33.59■■■□□ 2.97
USP42-204ENST00000451154 NEUROD6Q96NK8 337 aa33.59■■■□□ 2.97
USP42-204ENST00000451154 ZNF112Q9UJU3 913 aa33.59■■■□□ 2.97
USP42-204ENST00000451154 PPATQ06203 517 aa33.57■■■□□ 2.96
USP42-204ENST00000451154 DZIP1Q86YF9 867 aaKnown RBP33.57■■■□□ 2.96
USP42-204ENST00000451154 PNMA6EA0A0J9YXQ4 647 aa33.55■■■□□ 2.96
USP42-204ENST00000451154 RGS3P49796 1198 aa33.55■■■□□ 2.96
USP42-204ENST00000451154 MVPQ14764 893 aaKnown RBP33.55■■■□□ 2.96
USP42-204ENST00000451154 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.55■■■□□ 2.96
USP42-204ENST00000451154 GAKO14976 1311 aa33.54■■■□□ 2.96
USP42-204ENST00000451154 WDHD1O75717 1129 aaPredicted RBP33.54■■■□□ 2.96
USP42-204ENST00000451154 SPTY2D1Q68D10 685 aaPredicted RBP33.54■■■□□ 2.96
USP42-204ENST00000451154 PDS5AQ29RF7 1337 aaKnown RBP33.53■■■□□ 2.96
USP42-204ENST00000451154 TMEM57Q8N5G2 664 aa33.53■■■□□ 2.96
USP42-204ENST00000451154 FAM163AQ96GL9 167 aaPredicted RBP33.53■■■□□ 2.96
USP42-204ENST00000451154 IDI2Q9BXS1 227 aa33.53■■■□□ 2.96
USP42-204ENST00000451154 KIAA0100Q14667 2235 aaKnown RBP33.53■■■□□ 2.96
USP42-204ENST00000451154 TLR2O60603 784 aa33.52■■■□□ 2.96
USP42-204ENST00000451154 G3BP1Q13283 466 aaKnown RBP eCLIP33.52■■■□□ 2.96
USP42-204ENST00000451154 SLF2Q8IX21 1173 aa33.52■■■□□ 2.96
USP42-204ENST00000451154 MIER1Q8N108 512 aa33.52■■■□□ 2.96
USP42-204ENST00000451154 ZCCHC17Q9NP64 241 aaKnown RBP33.52■■■□□ 2.96
USP42-204ENST00000451154 GORABQ5T7V8 394 aa33.51■■■□□ 2.95
USP42-204ENST00000451154 ZKSCAN2Q63HK3 967 aa33.51■■■□□ 2.95
USP42-204ENST00000451154 ERICH6Q7L0X2 663 aa33.51■■■□□ 2.95
USP42-204ENST00000451154 ENTPD3O75355 529 aa33.5■■■□□ 2.95
USP42-204ENST00000451154 BTDP43251 543 aa33.5■■■□□ 2.95
USP42-204ENST00000451154 ARHGEF6Q15052 776 aa33.5■■■□□ 2.95
USP42-204ENST00000451154 SH3BP5LQ7L8J4 393 aa33.5■■■□□ 2.95
USP42-204ENST00000451154 ZSCAN29Q8IWY8 852 aaPredicted RBP33.5■■■□□ 2.95
USP42-204ENST00000451154 HMG20BQ9P0W2 317 aa33.5■■■□□ 2.95
USP42-204ENST00000451154 POTEFA5A3E0 1075 aa33.49■■■□□ 2.95
USP42-204ENST00000451154 HNRNPUQ00839 825 aaKnown RBP eCLIP33.49■■■□□ 2.95
USP42-204ENST00000451154 MECOMQ03112 1051 aa33.49■■■□□ 2.95
USP42-204ENST00000451154 NOL9Q5SY16 702 aaKnown RBP33.49■■■□□ 2.95
USP42-204ENST00000451154 PI16Q6UXB8 463 aa33.49■■■□□ 2.95
USP42-204ENST00000451154 KCNH4Q9UQ05 1017 aa33.49■■■□□ 2.95
USP42-204ENST00000451154 PHF20L1A8MW92 1017 aa33.48■■■□□ 2.95
USP42-204ENST00000451154 TBC1D9Q6ZT07 1266 aa33.48■■■□□ 2.95
USP42-204ENST00000451154 ZNF384Q8TF68 577 aa33.48■■■□□ 2.95
USP42-204ENST00000451154 ARMC5Q96C12 935 aa33.48■■■□□ 2.95
USP42-204ENST00000451154 ARHGAP39Q9C0H5 1083 aa33.48■■■□□ 2.95
USP42-204ENST00000451154 DDX4Q9NQI0 724 aaKnown RBP33.48■■■□□ 2.95
USP42-204ENST00000451154 SLURP2P0DP57 97 aa33.47■■■□□ 2.95
USP42-204ENST00000451154 PICALMQ13492 652 aa33.47■■■□□ 2.95
USP42-204ENST00000451154 SPATA5Q8NB90 893 aa33.47■■■□□ 2.95
USP42-204ENST00000451154 MKI67P46013 3256 aaKnown RBP33.47■■■□□ 2.95
USP42-204ENST00000451154 MROH7-TTC4A0A0A0MT08 1334 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms