RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 OS9Q13438 667 aaPredicted RBP27.11■■□□□ 1.93
CPSF7-208ENST00000450000 VGLL4Q14135 290 aa27.11■■□□□ 1.93
CPSF7-208ENST00000450000 CFHR5Q9BXR6 569 aa27.11■■□□□ 1.93
CPSF7-208ENST00000450000 USP40Q9NVE5 1235 aa27.11■■□□□ 1.93
CPSF7-208ENST00000450000 TCP10Q12799 353 aa27.1■■□□□ 1.93
CPSF7-208ENST00000450000 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.1■■□□□ 1.93
CPSF7-208ENST00000450000 ITPRIPQ8IWB1 547 aa27.1■■□□□ 1.93
CPSF7-208ENST00000450000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.1■■□□□ 1.93
CPSF7-208ENST00000450000 FAM151AQ8WW52 585 aa27.1■■□□□ 1.93
CPSF7-208ENST00000450000 WRNIP1Q96S55 665 aa27.1■■□□□ 1.93
CPSF7-208ENST00000450000 WDHD1O75717 1129 aaPredicted RBP27.09■■□□□ 1.93
CPSF7-208ENST00000450000 GTF2A2P52657 109 aa27.09■■□□□ 1.93
CPSF7-208ENST00000450000 CDC42EP5Q6NZY7 148 aa27.09■■□□□ 1.93
CPSF7-208ENST00000450000 OTUD5Q96G74 571 aa27.09■■□□□ 1.93
CPSF7-208ENST00000450000 ZNF341Q9BYN7 854 aa27.09■■□□□ 1.93
CPSF7-208ENST00000450000 GJA5P36382 358 aa27.08■■□□□ 1.93
CPSF7-208ENST00000450000 MLLT1Q03111 559 aaPredicted RBP27.08■■□□□ 1.93
CPSF7-208ENST00000450000 PNMA6EA0A0J9YXQ4 647 aa27.07■■□□□ 1.92
CPSF7-208ENST00000450000 IGF2BP3O00425 579 aaKnown RBP eCLIP27.07■■□□□ 1.92
CPSF7-208ENST00000450000 RASGRF1Q13972 1273 aa27.07■■□□□ 1.92
CPSF7-208ENST00000450000 ERICH6Q7L0X2 663 aa27.07■■□□□ 1.92
CPSF7-208ENST00000450000 MIGA2Q7L4E1 593 aa27.07■■□□□ 1.92
CPSF7-208ENST00000450000 ZBED9Q6R2W3 1325 aa27.06■■□□□ 1.92
CPSF7-208ENST00000450000 CCL15-CCL14A0A0B4J2E2 113 aa27.05■■□□□ 1.92
CPSF7-208ENST00000450000 CCL15Q16663 113 aa27.05■■□□□ 1.92
CPSF7-208ENST00000450000 ERO1BQ86YB8 467 aa27.05■■□□□ 1.92
CPSF7-208ENST00000450000 R3HDMLQ9H3Y0 253 aa27.05■■□□□ 1.92
CPSF7-208ENST00000450000 PDS5AQ29RF7 1337 aaKnown RBP27.05■■□□□ 1.92
CPSF7-208ENST00000450000 RPAP1Q9BWH6 1393 aaPredicted RBP27.05■■□□□ 1.92
CPSF7-208ENST00000450000 ZBTB22O15209 634 aa27.04■■□□□ 1.92
CPSF7-208ENST00000450000 ZSCAN29Q8IWY8 852 aaPredicted RBP27.04■■□□□ 1.92
CPSF7-208ENST00000450000 CNKSR2Q8WXI2 1034 aa27.04■■□□□ 1.92
CPSF7-208ENST00000450000 ZKSCAN4Q969J2 545 aaPredicted RBP27.04■■□□□ 1.92
CPSF7-208ENST00000450000 TESPA1A2RU30 521 aaPredicted RBP27.03■■□□□ 1.92
CPSF7-208ENST00000450000 ERO1AQ96HE7 468 aa27.03■■□□□ 1.92
CPSF7-208ENST00000450000 HPS5Q9UPZ3 1129 aa27.03■■□□□ 1.92
CPSF7-208ENST00000450000 MYH13Q9UKX3 1938 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 SPDYE5A6NIY4 337 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 SURF6O75683 361 aaKnown RBP27.02■■□□□ 1.92
CPSF7-208ENST00000450000 UQCRFS1P1P0C7P4 283 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 GSTO1P78417 241 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 ATP8B2P98198 1209 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 NFIAQ12857 509 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 CRHR2Q13324 411 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 FBXO46Q6PJ61 603 aaPredicted RBP27.02■■□□□ 1.92
CPSF7-208ENST00000450000 SPATA5Q8NB90 893 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 C1orf115Q9H7X2 142 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 ZFYVE28Q9HCC9 887 aa27.02■■□□□ 1.92
CPSF7-208ENST00000450000 LDHCP07864 332 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 CETPP11597 493 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 SNAPC2Q13487 334 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 TAF1CQ15572 869 aaPredicted RBP27.01■■□□□ 1.91
CPSF7-208ENST00000450000 CCDC158Q5M9N0 1113 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 RAI14Q9P0K7 980 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 TRIM17Q9Y577 477 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 SNCAIPQ9Y6H5 919 aa27.01■■□□□ 1.91
CPSF7-208ENST00000450000 MS4A1P11836 297 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 RGS19P49795 217 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 SOX10P56693 466 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 TTC39AQ5SRH9 613 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 BRI3BPQ8WY22 251 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 MS4A4AQ96JQ5 239 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 PTPN18Q99952 460 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 HMG20BQ9P0W2 317 aa27■■□□□ 1.91
CPSF7-208ENST00000450000 BTDP43251 543 aa26.99■■□□□ 1.91
CPSF7-208ENST00000450000 RGS3P49796 1198 aa26.99■■□□□ 1.91
CPSF7-208ENST00000450000 ARHGEF6Q15052 776 aa26.99■■□□□ 1.91
CPSF7-208ENST00000450000 LRP2BPQ9P2M1 347 aa26.99■■□□□ 1.91
CPSF7-208ENST00000450000 FAM198AQ9UFP1 575 aa26.99■■□□□ 1.91
CPSF7-208ENST00000450000 GAKO14976 1311 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 ENTPD3O75355 529 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 SP3Q02447 781 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 MECOMQ03112 1051 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 PPATQ06203 517 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 PPIL2Q13356 520 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 PICALMQ13492 652 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 POLA2Q14181 598 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 SSH3Q8TE77 659 aa26.98■■□□□ 1.91
CPSF7-208ENST00000450000 NOL10Q9BSC4 688 aaKnown RBP26.98■■□□□ 1.91
CPSF7-208ENST00000450000 MROH7-TTC4A0A0A0MT08 1334 aa26.97■■□□□ 1.91
CPSF7-208ENST00000450000 INPP5BP32019 993 aa26.97■■□□□ 1.91
CPSF7-208ENST00000450000 FAM163AQ96GL9 167 aaPredicted RBP26.97■■□□□ 1.91
CPSF7-208ENST00000450000 IDI2Q9BXS1 227 aa26.97■■□□□ 1.91
CPSF7-208ENST00000450000 GPR108Q9NPR9 543 aa26.97■■□□□ 1.91
CPSF7-208ENST00000450000 IRF6O14896 467 aa26.96■■□□□ 1.91
CPSF7-208ENST00000450000 ZBTB7BO15156 539 aaPredicted RBP26.96■■□□□ 1.91
CPSF7-208ENST00000450000 ARID4AP29374 1257 aaPredicted RBP26.96■■□□□ 1.91
CPSF7-208ENST00000450000 TNNI3KQ59H18 835 aa26.96■■□□□ 1.91
CPSF7-208ENST00000450000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.96■■□□□ 1.91
CPSF7-208ENST00000450000 FPGT-TNNI3KV9GXZ4 949 aa26.96■■□□□ 1.91
CPSF7-208ENST00000450000 TBC1D9Q6ZT07 1266 aa26.95■■□□□ 1.9
CPSF7-208ENST00000450000 CD99L2Q8TCZ2 262 aa26.95■■□□□ 1.9
CPSF7-208ENST00000450000 EFCC1Q9HA90 598 aa26.95■■□□□ 1.9
CPSF7-208ENST00000450000 PICK1Q9NRD5 415 aa26.95■■□□□ 1.9
CPSF7-208ENST00000450000 RLBP1P12271 317 aa26.94■■□□□ 1.9
CPSF7-208ENST00000450000 ZFPM1Q8IX07 1006 aa26.94■■□□□ 1.9
CPSF7-208ENST00000450000 PI16Q6UXB8 463 aa26.93■■□□□ 1.9
CPSF7-208ENST00000450000 OTOP1Q7RTM1 612 aa26.93■■□□□ 1.9
CPSF7-208ENST00000450000 FAM43AQ8N2R8 423 aa26.93■■□□□ 1.9
CPSF7-208ENST00000450000 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms