RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CRKP46108 304 aa23.36■■□□□ 1.33
SGCE-207ENST00000447873 PPP4CP60510 307 aa23.36■■□□□ 1.33
SGCE-207ENST00000447873 ZNF541Q9H0D2 1346 aa23.36■■□□□ 1.33
SGCE-207ENST00000447873 ADAMTSL1Q8N6G6 1762 aa23.36■■□□□ 1.33
SGCE-207ENST00000447873 PATL2C9JE40 543 aaKnown RBP23.35■■□□□ 1.33
SGCE-207ENST00000447873 USP17L8P0C7I0 530 aa23.35■■□□□ 1.33
SGCE-207ENST00000447873 RPS12P25398 132 aaKnown RBP23.35■■□□□ 1.33
SGCE-207ENST00000447873 RBM5P52756 815 aaKnown RBP eCLIP23.35■■□□□ 1.33
SGCE-207ENST00000447873 TBC1D32Q96NH3 1257 aa23.35■■□□□ 1.33
SGCE-207ENST00000447873 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
SGCE-207ENST00000447873 RBM8AQ9Y5S9 174 aaKnown RBP23.35■■□□□ 1.33
SGCE-207ENST00000447873 PLCG2P16885 1265 aa23.35■■□□□ 1.33
SGCE-207ENST00000447873 ZDHHC15Q96MV8 337 aa23.35■■□□□ 1.33
SGCE-207ENST00000447873 CRNKL1Q9BZJ0 848 aaKnown RBP23.35■■□□□ 1.33
SGCE-207ENST00000447873 U3KPZ7 1027 aaPredicted RBP23.35■■□□□ 1.33
SGCE-207ENST00000447873 PRKAB2O43741 272 aa23.34■■□□□ 1.33
SGCE-207ENST00000447873 FOXP2O15409 715 aa23.33■■□□□ 1.33
SGCE-207ENST00000447873 HSPA4P34932 840 aa23.33■■□□□ 1.33
SGCE-207ENST00000447873 RBM25P49756 843 aaKnown RBP23.33■■□□□ 1.33
SGCE-207ENST00000447873 GPC2Q8N158 579 aa23.33■■□□□ 1.33
SGCE-207ENST00000447873 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
SGCE-207ENST00000447873 NACAP1Q9BZK3 213 aa23.33■■□□□ 1.33
SGCE-207ENST00000447873 RPAP1Q9BWH6 1393 aaPredicted RBP23.33■■□□□ 1.33
SGCE-207ENST00000447873 GSG1L2A8MUP6 293 aa23.32■■□□□ 1.32
SGCE-207ENST00000447873 GMPSP49915 693 aaPredicted RBP23.32■■□□□ 1.32
SGCE-207ENST00000447873 CFAP100Q494V2 611 aa23.32■■□□□ 1.32
SGCE-207ENST00000447873 APOBEC3HQ6NTF7 200 aaKnown RBP23.32■■□□□ 1.32
SGCE-207ENST00000447873 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
SGCE-207ENST00000447873 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
SGCE-207ENST00000447873 CTNNA3Q9UI47 895 aa23.32■■□□□ 1.32
SGCE-207ENST00000447873 FGAP02671 866 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 MMP14P50281 582 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 DPF2Q92785 391 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 NECTIN1Q15223 517 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 RNF20Q5VTR2 975 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 NAPBQ9H115 298 aa23.31■■□□□ 1.32
SGCE-207ENST00000447873 CDK5RAP2Q96SN8 1893 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 DCAF8L1A6NGE4 600 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 USP5P45974 858 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 TDO2P48775 406 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 RHBDL3P58872 404 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 ALX1Q15699 326 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 TEX11Q8IYF3 940 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 DDRGK1Q96HY6 314 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 EPB41L4AQ9HCS5 686 aaPredicted RBP23.3■■□□□ 1.32
SGCE-207ENST00000447873 ATP8A2Q9NTI2 1148 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 USP40Q9NVE5 1235 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 PCDHAC2Q9Y5I4 1007 aa23.3■■□□□ 1.32
SGCE-207ENST00000447873 DLGAP5Q15398 846 aa23.29■■□□□ 1.32
SGCE-207ENST00000447873 CREB3L3Q68CJ9 461 aa23.29■■□□□ 1.32
SGCE-207ENST00000447873 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
SGCE-207ENST00000447873 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
SGCE-207ENST00000447873 ZNF280AP59817 542 aaPredicted RBP23.28■■□□□ 1.32
SGCE-207ENST00000447873 CDC42EP5Q6NZY7 148 aa23.28■■□□□ 1.32
SGCE-207ENST00000447873 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
SGCE-207ENST00000447873 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
SGCE-207ENST00000447873 TGFBRAP1Q8WUH2 860 aa23.28■■□□□ 1.32
SGCE-207ENST00000447873 CNOT7Q9UIV1 285 aaKnown RBP23.28■■□□□ 1.32
SGCE-207ENST00000447873 BAZ2AQ9UIF9 1905 aaKnown RBP23.28■■□□□ 1.32
SGCE-207ENST00000447873 ZMYM6O95789 1325 aa23.28■■□□□ 1.32
SGCE-207ENST00000447873 ZC3H4Q9UPT8 1303 aaKnown RBP23.28■■□□□ 1.32
SGCE-207ENST00000447873 SLC27A2O14975 620 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 IMMTQ16891 758 aaKnown RBP23.27■■□□□ 1.32
SGCE-207ENST00000447873 PRMT6Q96LA8 375 aaPredicted RBP23.27■■□□□ 1.32
SGCE-207ENST00000447873 MYOZ2Q9NPC6 264 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 DCP1AQ9NPI6 582 aaPredicted RBP23.27■■□□□ 1.32
SGCE-207ENST00000447873 PALD1Q9ULE6 856 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 FOCADQ5VW36 1801 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 SHTN1A0MZ66 631 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 SPDYE2BA6NHP3 402 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 SPDYE6P0CI01 402 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 ANAPC15P60006 121 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 DPY19L2Q6NUT2 758 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 MTMR14Q8NCE2 650 aa23.27■■□□□ 1.32
SGCE-207ENST00000447873 DDNO94850 711 aaPredicted RBP23.26■■□□□ 1.31
SGCE-207ENST00000447873 RASEFQ8IZ41 740 aa23.26■■□□□ 1.31
SGCE-207ENST00000447873 NAV1Q8NEY1 1877 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 H7C1D1 291 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 ZNF213O14771 459 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 CYP21A2P08686 494 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 MAPKAPK5Q8IW41 473 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 KCNB2Q92953 911 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 TDRD3Q9H7E2 651 aaKnown RBP23.25■■□□□ 1.31
SGCE-207ENST00000447873 GPRC5DQ9NZD1 345 aa23.25■■□□□ 1.31
SGCE-207ENST00000447873 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
SGCE-207ENST00000447873 HAND2P61296 217 aa23.24■■□□□ 1.31
SGCE-207ENST00000447873 MCM9Q9NXL9 1143 aa23.24■■□□□ 1.31
SGCE-207ENST00000447873 SNX14Q9Y5W7 946 aa23.24■■□□□ 1.31
SGCE-207ENST00000447873 MYO1BO43795 1136 aa23.23■■□□□ 1.31
SGCE-207ENST00000447873 WDHD1O75717 1129 aaPredicted RBP23.23■■□□□ 1.31
SGCE-207ENST00000447873 PICALMQ13492 652 aa23.23■■□□□ 1.31
SGCE-207ENST00000447873 RBM26Q5T8P6 1007 aaKnown RBP23.23■■□□□ 1.31
SGCE-207ENST00000447873 MKRN1Q9UHC7 482 aaKnown RBP23.23■■□□□ 1.31
SGCE-207ENST00000447873 RBM19Q9Y4C8 960 aaKnown RBP23.23■■□□□ 1.31
SGCE-207ENST00000447873 FLT1P17948 1338 aa23.23■■□□□ 1.31
SGCE-207ENST00000447873 MYH1P12882 1939 aa23.23■■□□□ 1.31
SGCE-207ENST00000447873 TMOD2Q9NZR1 351 aa23.23■■□□□ 1.31
SGCE-207ENST00000447873 ARPP21Q9UBL0 812 aaPredicted RBP23.23■■□□□ 1.31
SGCE-207ENST00000447873 MINDY4BA8MYZ0 360 aa23.22■■□□□ 1.31
SGCE-207ENST00000447873 USP17L12C9JPN9 530 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms