RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 E7EWF7 191 aa29.62■■■□□ 2.33
RFFL-206ENST00000447669 IMMTQ16891 758 aaKnown RBP29.62■■■□□ 2.33
RFFL-206ENST00000447669 SOGA3Q5TF21 947 aa29.62■■■□□ 2.33
RFFL-206ENST00000447669 SH3RF3Q8TEJ3 882 aaPredicted RBP29.62■■■□□ 2.33
RFFL-206ENST00000447669 USP17L3A6NCW0 530 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 USP17L4A6NCW7 530 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 ZNF213O14771 459 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 RAD17O75943 681 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 TDO2P48775 406 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 RASSF7Q02833 373 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 USP17L1Q7RTZ2 530 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 KIAA0825Q8IV33 1275 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 NKX2-3Q8TAU0 364 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 TTC14Q96N46 770 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 GNAT2P19087 354 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 GSTO1P78417 241 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 EVX2Q03828 476 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 STRIP1Q5VSL9 837 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 RUFY3Q7L099 469 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 TAOK3Q9H2K8 898 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 FOXD4L1Q9NU39 408 aa29.61■■■□□ 2.33
RFFL-206ENST00000447669 CTDSPL2Q05D32 466 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 TBC1D10CQ8IV04 446 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 NEK1Q96PY6 1258 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 TM6SF1Q9BZW5 370 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 PCDHAC2Q9Y5I4 1007 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 CYP46A1Q9Y6A2 500 aa29.6■■■□□ 2.33
RFFL-206ENST00000447669 CYP2D7A0A087X1C5 515 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 K7ELQ4 463 aaPredicted RBP29.59■■■□□ 2.33
RFFL-206ENST00000447669 IARSP41252 1262 aaKnown RBP29.59■■■□□ 2.33
RFFL-206ENST00000447669 BTDP43251 543 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 TACC3Q9Y6A5 838 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 AK2P54819 239 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 ALX1Q15699 326 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 SLC4A8Q2Y0W8 1093 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 BLOC1S2Q6QNY1 142 aa29.59■■■□□ 2.33
RFFL-206ENST00000447669 PRELPP51888 382 aa29.58■■■□□ 2.33
RFFL-206ENST00000447669 CHST3Q7LGC8 479 aa29.58■■■□□ 2.33
RFFL-206ENST00000447669 LRRC2Q9BYS8 371 aa29.58■■■□□ 2.33
RFFL-206ENST00000447669 PDRG1Q9NUG6 133 aa29.58■■■□□ 2.33
RFFL-206ENST00000447669 DAGLAQ9Y4D2 1042 aa29.58■■■□□ 2.33
RFFL-206ENST00000447669 PSMA5P28066 241 aa29.57■■■□□ 2.32
RFFL-206ENST00000447669 LDHCP07864 332 aa29.57■■■□□ 2.32
RFFL-206ENST00000447669 NACAP1Q9BZK3 213 aa29.57■■■□□ 2.32
RFFL-206ENST00000447669 MINDY4BA8MYZ0 360 aa29.56■■■□□ 2.32
RFFL-206ENST00000447669 RPS6KB1P23443 525 aa29.56■■■□□ 2.32
RFFL-206ENST00000447669 KRT32Q14532 448 aa29.56■■■□□ 2.32
RFFL-206ENST00000447669 CRNKL1Q9BZJ0 848 aaKnown RBP29.56■■■□□ 2.32
RFFL-206ENST00000447669 GPR75-ASB3A0A0A6YYF3 556 aa29.55■■■□□ 2.32
RFFL-206ENST00000447669 DCP1AQ9NPI6 582 aaPredicted RBP29.55■■■□□ 2.32
RFFL-206ENST00000447669 PSMD14O00487 310 aa29.55■■■□□ 2.32
RFFL-206ENST00000447669 SYT17Q9BSW7 474 aa29.55■■■□□ 2.32
RFFL-206ENST00000447669 SLKQ9H2G2 1235 aaPredicted RBP29.55■■■□□ 2.32
RFFL-206ENST00000447669 GAKO14976 1311 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 BAG3O95817 575 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 NIM1KQ8IY84 436 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 TGFBRAP1Q8WUH2 860 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 SUGT1Q9Y2Z0 365 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 CDK5RAP2Q96SN8 1893 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 PPP4CP60510 307 aa29.54■■■□□ 2.32
RFFL-206ENST00000447669 FAM163AQ96GL9 167 aaPredicted RBP29.54■■■□□ 2.32
RFFL-206ENST00000447669 ZBTB12Q9Y330 459 aaPredicted RBP29.54■■■□□ 2.32
RFFL-206ENST00000447669 ARFGEF1Q9Y6D6 1849 aa29.53■■■□□ 2.32
RFFL-206ENST00000447669 CYP2D6P10635 497 aa29.53■■■□□ 2.32
RFFL-206ENST00000447669 NOL10Q9BSC4 688 aaKnown RBP29.53■■■□□ 2.32
RFFL-206ENST00000447669 ZMYM6O95789 1325 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 USP17L12C9JPN9 530 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 USP17L21D6R901 530 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 RHBDL3P58872 404 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 CTR9Q6PD62 1173 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 ZNRF3Q9ULT6 936 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 USP5P45974 858 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 TMED8Q6PL24 325 aaPredicted RBP29.52■■■□□ 2.32
RFFL-206ENST00000447669 TMX3Q96JJ7 454 aa29.52■■■□□ 2.32
RFFL-206ENST00000447669 NEDD4P46934 1319 aa29.51■■■□□ 2.31
RFFL-206ENST00000447669 PSME4Q14997 1843 aa29.51■■■□□ 2.31
RFFL-206ENST00000447669 USP17L8P0C7I0 530 aa29.51■■■□□ 2.31
RFFL-206ENST00000447669 PPARAQ07869 468 aa29.51■■■□□ 2.31
RFFL-206ENST00000447669 MAPKAPK5Q8IW41 473 aa29.51■■■□□ 2.31
RFFL-206ENST00000447669 CRKP46108 304 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 SLF2Q8IX21 1173 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 DTNBO60941 627 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 IGSF3O75054 1194 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 LARGE1O95461 756 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 TOB2Q14106 344 aaPredicted RBP29.5■■■□□ 2.31
RFFL-206ENST00000447669 TEX11Q8IYF3 940 aa29.5■■■□□ 2.31
RFFL-206ENST00000447669 GPHNQ9NQX3 736 aaPredicted RBP29.5■■■□□ 2.31
RFFL-206ENST00000447669 MKRN1Q9UHC7 482 aaKnown RBP29.5■■■□□ 2.31
RFFL-206ENST00000447669 CXCL9Q07325 125 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 Q6ZUG5 572 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 TEKT1Q969V4 418 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 VPS33BQ9H267 617 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 MCM9Q9NXL9 1143 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 SAP30BPQ9UHR5 308 aaKnown RBP29.49■■■□□ 2.31
RFFL-206ENST00000447669 RBM5P52756 815 aaKnown RBP eCLIP29.49■■■□□ 2.31
RFFL-206ENST00000447669 FKBP1AP62942 108 aaKnown RBP29.49■■■□□ 2.31
RFFL-206ENST00000447669 APOBEC3HQ6NTF7 200 aaKnown RBP29.49■■■□□ 2.31
RFFL-206ENST00000447669 DHX32Q7L7V1 743 aaKnown RBP29.49■■■□□ 2.31
RFFL-206ENST00000447669 ATP8A2Q9NTI2 1148 aa29.49■■■□□ 2.31
RFFL-206ENST00000447669 B4E1Z4 1266 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms