RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ADGRA1Q86SQ6 560 aa22.85■■□□□ 1.25
FAM3A-215ENST00000447601 TFIP11Q9UBB9 837 aaKnown RBP22.85■■□□□ 1.25
FAM3A-215ENST00000447601 GOLGA6L4A6NEF3 574 aa22.85■■□□□ 1.25
FAM3A-215ENST00000447601 METAP2P50579 478 aaKnown RBP eCLIP22.85■■□□□ 1.255e-7■■□□□ 13.5
FAM3A-215ENST00000447601 TPRNQ4KMQ1 711 aa22.85■■□□□ 1.25
FAM3A-215ENST00000447601 SGMS1Q86VZ5 419 aa22.85■■□□□ 1.25
FAM3A-215ENST00000447601 IGDCC4Q8TDY8 1250 aa22.85■■□□□ 1.25
FAM3A-215ENST00000447601 CDKL5O76039 1030 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 LIFRP42702 1097 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 TMEM67Q5HYA8 995 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 APOA5Q6Q788 366 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 RGS22Q8NE09 1264 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 RIOK1Q9BRS2 568 aaKnown RBP22.84■■□□□ 1.25
FAM3A-215ENST00000447601 MTA3Q9BTC8 594 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 TCHHQ07283 1943 aa22.84■■□□□ 1.25
FAM3A-215ENST00000447601 KDM4AO75164 1064 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 FOSBP53539 338 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 PRR5LQ6MZQ0 368 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 CPLX2Q6PUV4 134 aaKnown RBP22.83■■□□□ 1.25
FAM3A-215ENST00000447601 NFXL1Q6ZNB6 911 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 LY9Q9HBG7 655 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 TFCP2L1Q9NZI6 479 aa22.83■■□□□ 1.25
FAM3A-215ENST00000447601 ORC3Q9UBD5 711 aaPredicted RBP22.83■■□□□ 1.25
FAM3A-215ENST00000447601 TNRC6CQ9HCJ0 1690 aaKnown RBP22.83■■□□□ 1.25
FAM3A-215ENST00000447601 TAF1P21675 1872 aa22.83■■□□□ 1.24
FAM3A-215ENST00000447601 GYS1P13807 737 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 ZNF396Q96N95 335 aaPredicted RBP22.82■■□□□ 1.24
FAM3A-215ENST00000447601 PPP1R9BQ96SB3 815 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 ZSWIM5Q9P217 1185 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 LEMD3Q9Y2U8 911 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 IFIT3O14879 490 aaKnown RBP22.82■■□□□ 1.24
FAM3A-215ENST00000447601 ST5P78524 1137 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 PPARAQ07869 468 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 SART3Q15020 963 aaKnown RBP22.82■■□□□ 1.24
FAM3A-215ENST00000447601 C8orf76Q96K31 380 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 ANAPC4Q9UJX5 808 aa22.82■■□□□ 1.24
FAM3A-215ENST00000447601 ZBTB43O43298 467 aa22.81■■□□□ 1.24
FAM3A-215ENST00000447601 BRIP1Q9BX63 1249 aa22.81■■□□□ 1.24
FAM3A-215ENST00000447601 INCENPQ9NQS7 918 aa22.81■■□□□ 1.24
FAM3A-215ENST00000447601 ANKIB1Q9P2G1 1089 aa22.81■■□□□ 1.24
FAM3A-215ENST00000447601 IGSF3O75054 1194 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 PPFIA3O75145 1194 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 TRIM37O94972 964 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 GIMAP6Q6P9H5 292 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 RAB11FIP4Q86YS3 637 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 FAM43AQ8N2R8 423 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 SDR42E1Q8WUS8 393 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 RPGRQ92834 1020 aaKnown RBP22.8■■□□□ 1.24
FAM3A-215ENST00000447601 NSUN4Q96CB9 384 aaKnown RBP22.8■■□□□ 1.24
FAM3A-215ENST00000447601 IRS2Q9Y4H2 1338 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 TACC3Q9Y6A5 838 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 XDHP47989 1333 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 CCDC69A6NI79 296 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 ADD1P35611 737 aaKnown RBP22.8■■□□□ 1.24
FAM3A-215ENST00000447601 TRIM44Q96DX7 344 aaPredicted RBP22.8■■□□□ 1.24
FAM3A-215ENST00000447601 TOMM22Q9NS69 142 aa22.8■■□□□ 1.24
FAM3A-215ENST00000447601 GUCY1B3Q02153 619 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 MECOMQ03112 1051 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 RRP12Q5JTH9 1297 aaKnown RBP22.79■■□□□ 1.24
FAM3A-215ENST00000447601 SYNE3Q6ZMZ3 975 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 FBXO18Q8NFZ0 1043 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 ZNF384Q8TF68 577 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 SLC12A7Q9Y666 1083 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 CACNA1SQ13698 1873 aa22.79■■□□□ 1.24
FAM3A-215ENST00000447601 ERICH2A1L162 156 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 GOLGA8AA7E2F4 631 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 SERPINB2P05120 415 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 CHAF1AQ13111 956 aaPredicted RBP22.78■■□□□ 1.24
FAM3A-215ENST00000447601 CRY2Q49AN0 593 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 SPTY2D1Q68D10 685 aaPredicted RBP22.78■■□□□ 1.24
FAM3A-215ENST00000447601 MICU3Q86XE3 530 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 TMTC2Q8N394 836 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 DYNLL1P63167 89 aaKnown RBP22.78■■□□□ 1.24
FAM3A-215ENST00000447601 SENP2Q9HC62 589 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 DDX19AQ9NUU7 478 aaKnown RBP22.78■■□□□ 1.24
FAM3A-215ENST00000447601 RCOR1Q9UKL0 485 aa22.78■■□□□ 1.24
FAM3A-215ENST00000447601 NID2Q14112 1375 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 UBR3Q6ZT12 1888 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 MINDY4BA8MYZ0 360 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 PCP11498 1178 aaKnown RBP22.77■■□□□ 1.24
FAM3A-215ENST00000447601 LIG1P18858 919 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 BICD2Q8TD16 824 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 ESR2Q92731 530 aa22.77■■□□□ 1.24
FAM3A-215ENST00000447601 WTAPQ15007 396 aa22.76■■□□□ 1.23
FAM3A-215ENST00000447601 BRAPQ7Z569 592 aa22.76■■□□□ 1.23
FAM3A-215ENST00000447601 RNF214Q8ND24 703 aa22.76■■□□□ 1.23
FAM3A-215ENST00000447601 RBM17Q96I25 401 aaKnown RBP22.76■■□□□ 1.23
FAM3A-215ENST00000447601 PGBD1Q96JS3 809 aa22.76■■□□□ 1.23
FAM3A-215ENST00000447601 NUP62CLQ9H1M0 184 aa22.76■■□□□ 1.23
FAM3A-215ENST00000447601 CDC27P30260 824 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 RCAN1P53805 252 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 C15orf52Q6ZUT6 534 aaKnown RBP22.75■■□□□ 1.23
FAM3A-215ENST00000447601 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
FAM3A-215ENST00000447601 CRNKL1Q9BZJ0 848 aaKnown RBP22.75■■□□□ 1.23
FAM3A-215ENST00000447601 RXRAP19793 462 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 PRDX5P30044 214 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 TXNRD1Q16881 649 aa22.75■■□□□ 1.23
FAM3A-215ENST00000447601 ZNF804AQ7Z570 1209 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms