RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 FAM13AO94988 1023 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 B3GALT4O96024 378 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 CTSBP07858 339 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 NPR3P17342 541 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 MTMR3Q13615 1198 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 PDE3AQ14432 1141 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 CYP27C1Q4G0S4 372 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 OGFOD3Q6PK18 319 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 SEZ6L2Q6UXD5 910 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 ATG4DQ86TL0 474 aaPredicted RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 WFDC3Q8IUB2 231 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 GJD3Q8N144 294 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 BHLHE22Q8NFJ8 381 aaPredicted RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 FAM168AQ92567 244 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 CCDC97Q96F63 343 aaPredicted RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 TRIM56Q9BRZ2 755 aaKnown RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 GSX1Q9H4S2 264 aaPredicted RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 LIN7BQ9HAP6 207 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 RC3H2Q9HBD1 1191 aaKnown RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 ZFYVE28Q9HCC9 887 aa2.42□□□□□ -2.02
SNHG3-203ENST00000447507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.42□□□□□ -2.02
SNHG3-203ENST00000447507 A0A1W2PP55 124 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 DYNC1LI2O43237 492 aaPredicted RBP2.41□□□□□ -2.02
SNHG3-203ENST00000447507 FZD6O60353 706 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 AOC2O75106 756 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 POLR3DP05423 398 aaPredicted RBP2.41□□□□□ -2.02
SNHG3-203ENST00000447507 FUT4P22083 530 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 GRIA4P48058 902 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 HNRNPUQ00839 825 aaKnown RBP eCLIP2.41□□□□□ -2.02
SNHG3-203ENST00000447507 AP3B2Q13367 1082 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 SF3B2Q13435 895 aaKnown RBP2.41□□□□□ -2.02
SNHG3-203ENST00000447507 ZNF423Q2M1K9 1284 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 SPRED3Q2MJR0 410 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 LCNL1Q6ZST4 164 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 SPRED2Q7Z698 418 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 GALNT12Q8IXK2 581 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 NETO1Q8TDF5 533 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 TOX2Q96NM4 488 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 TCF12Q99081 682 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 WDR18Q9BV38 432 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 ZNF576Q9H609 170 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 PIDD1Q9HB75 910 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 C1GALT1Q9NS00 363 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 LMCD1Q9NZU5 365 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 MTMR7Q9Y216 660 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 CARMIL2Q6F5E8 1435 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 SYNGAP1Q96PV0 1343 aa2.41□□□□□ -2.02
SNHG3-203ENST00000447507 TMPRSS2O15393 492 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 ECEL1O95672 775 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 RNASE1P07998 156 aaKnown RBP2.4□□□□□ -2.03
SNHG3-203ENST00000447507 FAM87AP0C7U9 286 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 CD8BP10966 210 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 ITPKAP23677 461 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 SSFA2P28290 1259 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 PRKCQQ04759 706 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 BNIP3Q12983 259 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 CDK5R2Q13319 367 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 C1QL4Q86Z23 238 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 KSR1Q8IVT5 923 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 PLD6Q8N2A8 252 aaKnown RBP2.4□□□□□ -2.03
SNHG3-203ENST00000447507 FAM181AQ8N9Y4 354 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 GLIS3Q8NEA6 775 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 TMEM40Q8WWA1 233 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 SLC38A3Q99624 504 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 ATXN3LQ9H3M9 355 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 LGR6Q9HBX8 967 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 SERPINA10Q9UK55 444 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 VAV3Q9UKW4 847 aa2.4□□□□□ -2.03
SNHG3-203ENST00000447507 CEACAM5P06731 702 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 CTSWP56202 376 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ID3Q02535 119 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 FKBP4Q02790 459 aaKnown RBP eCLIP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 PTPN12Q05209 780 aaKnown RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ZNF211Q13398 564 aaPredicted RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 IFI16Q16666 785 aaKnown RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ANGEL2Q5VTE6 544 aaKnown RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 KIAA0319Q5VV43 1072 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ARHGAP27Q6ZUM4 889 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 LRRN4CLQ8ND94 238 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ZSCAN18Q8TBC5 510 aaPredicted RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 PI4K2BQ8TCG2 481 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 BORCS6Q96GS4 357 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 HRASLS5Q96KN8 279 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 EHD4Q9H223 541 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 MKNK2Q9HBH9 465 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 MBNL3Q9NUK0 354 aaKnown RBP2.39□□□□□ -2.03
SNHG3-203ENST00000447507 CCDC87Q9NVE4 849 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 CRIM1Q9NZV1 1036 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 ADAMTS6Q9UKP5 1117 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 PPP1R9AQ9ULJ8 1098 aa2.39□□□□□ -2.03
SNHG3-203ENST00000447507 TMEM265A0A087WTH1 108 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 TMEM88BA6NKF7 163 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 ABL1P00519 1130 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 NEFLP07196 543 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 SLFN14P0C7P3 912 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 LIG1P18858 919 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 CD96P40200 585 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 RPS26P11Q5JNZ5 115 aaPredicted RBP2.38□□□□□ -2.03
SNHG3-203ENST00000447507 USPL1Q5W0Q7 1092 aa2.38□□□□□ -2.03
SNHG3-203ENST00000447507 PRPF40BQ6NWY9 871 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms