RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 KCNB2Q92953 911 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 TANGO6Q9C0B7 1094 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 CACNA2D2Q9NY47 1150 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 PRKAG2Q9UGJ0 569 aa6.83□□□□□ -1.32
HMGB1P16-201ENST00000447155 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 GNB5O14775 395 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 F13A1P00488 732 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 NLRP12P59046 1061 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 COL9A2Q14055 689 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 LINC00114Q6XXX2 140 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 BNC2Q6ZN30 1099 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 GAL3ST3Q96A11 431 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 SEC16BQ96JE7 1060 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 USP26Q9BXU7 913 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 LRRC3Q9BY71 257 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 UBP1Q9NZI7 540 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 MKL2Q9ULH7 1088 aa6.82□□□□□ -1.32
HMGB1P16-201ENST00000447155 FAM221AA4D161 298 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 ADAM11O75078 769 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 CILPO75339 1184 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 MPP2Q14168 576 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 FOXD4L6Q3SYB3 417 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 FOXD4L3Q6VB84 417 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 FMR1NBQ8N0W7 255 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 UBXN4Q92575 508 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 NKD1Q969G9 470 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 PLVAPQ9BX97 442 aa6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 CCDC86Q9H6F5 360 aaKnown RBP6.81□□□□□ -1.32
HMGB1P16-201ENST00000447155 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 DLL1O00548 723 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 DDX3YO15523 660 aaKnown RBP6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 ECEL1O95672 775 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 BPNT1O95861 308 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 CRKP46108 304 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 SNRPNP63162 240 aaKnown RBP6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 PDE3AQ14432 1141 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 CWF19L2Q2TBE0 894 aaKnown RBP6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 GPBAR1Q8TDU6 330 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 ACSBG1Q96GR2 724 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 GINM1Q9NU53 330 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
HMGB1P16-201ENST00000447155 TLR3O15455 904 aaKnown RBP6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 CTSBP07858 339 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 FGRP09769 529 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 SOX9P48436 509 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 TRIM28Q13263 835 aaKnown RBP6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 SEZ6Q53EL9 994 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 PODNQ7Z5L7 613 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 FBXO27Q8NI29 283 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 ARMC5Q96C12 935 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 EFR3BQ9Y2G0 817 aa6.79□□□□□ -1.32
HMGB1P16-201ENST00000447155 ZNF862O60290 1169 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 NASPP49321 788 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 DUOXA2Q1HG44 320 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 KIF4BQ2VIQ3 1234 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 ZSCAN1Q8NBB4 408 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 PCDHA4Q9UN74 947 aa6.78□□□□□ -1.32
HMGB1P16-201ENST00000447155 SYNGAP1Q96PV0 1343 aa6.77□□□□□ -1.32
HMGB1P16-201ENST00000447155 ELNP15502 786 aa6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 LIG1P18858 919 aa6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 PRRT3Q5FWE3 981 aa6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
HMGB1P16-201ENST00000447155 MEGF11A6BM72 1044 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 DLGAP3O95886 979 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 ZNF165P49910 485 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 HDXQ7Z353 690 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 REXO1Q8N1G1 1221 aaKnown RBP6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 BEND7Q8N7W2 519 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 WDR89Q96FK6 387 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 RUSC1Q9BVN2 902 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 SNCAIPQ9Y6H5 919 aa6.76□□□□□ -1.33
HMGB1P16-201ENST00000447155 AOC2O75106 756 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 WISP1O95388 367 aa6.75□□□□□ -1.33
HMGB1P16-201ENST00000447155 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms