RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CDC42EP5Q6NZY7 148 aa22.59■■□□□ 1.21
COL9A1-205ENST00000447041 FBXO46Q6PJ61 603 aaPredicted RBP22.59■■□□□ 1.21
COL9A1-205ENST00000447041 SNCAIPQ9Y6H5 919 aa22.59■■□□□ 1.21
COL9A1-205ENST00000447041 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.59■■□□□ 1.21
COL9A1-205ENST00000447041 TFCP2Q12800 502 aa22.58■■□□□ 1.21
COL9A1-205ENST00000447041 NFIAQ12857 509 aa22.58■■□□□ 1.21
COL9A1-205ENST00000447041 MIER1Q8N108 512 aa22.58■■□□□ 1.21
COL9A1-205ENST00000447041 BRI3BPQ8WY22 251 aa22.58■■□□□ 1.21
COL9A1-205ENST00000447041 MYH2Q9UKX2 1941 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 CCL15-CCL14A0A0B4J2E2 113 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 A0A1B0GUL7 405 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 SPDYE5A6NIY4 337 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
COL9A1-205ENST00000447041 TCP10Q12799 353 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 RASGRF1Q13972 1273 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 CCL15Q16663 113 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 MIGA2Q7L4E1 593 aa22.57■■□□□ 1.2
COL9A1-205ENST00000447041 ZKSCAN4Q969J2 545 aaPredicted RBP22.57■■□□□ 1.2
COL9A1-205ENST00000447041 TNRC18O15417 2968 aaPredicted RBP22.56■■□□□ 1.2
COL9A1-205ENST00000447041 GTF2A2P52657 109 aa22.56■■□□□ 1.2
COL9A1-205ENST00000447041 FAM151AQ8WW52 585 aa22.56■■□□□ 1.2
COL9A1-205ENST00000447041 HOOK2Q96ED9 719 aa22.56■■□□□ 1.2
COL9A1-205ENST00000447041 XAGE2Q96GT9 111 aa22.56■■□□□ 1.2
COL9A1-205ENST00000447041 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
COL9A1-205ENST00000447041 DOCK2Q92608 1830 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 HTTP42858 3142 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 ZBTB22O15209 634 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 GNAI2P04899 355 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 DCAF15Q66K64 600 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 OTOP1Q7RTM1 612 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 CD99L2Q8TCZ2 262 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 FAM198AQ9UFP1 575 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 AK9Q5TCS8 1911 aa22.55■■□□□ 1.2
COL9A1-205ENST00000447041 FAM43AQ8N2R8 423 aa22.54■■□□□ 1.2
COL9A1-205ENST00000447041 ZNF341Q9BYN7 854 aa22.54■■□□□ 1.2
COL9A1-205ENST00000447041 USP40Q9NVE5 1235 aa22.54■■□□□ 1.2
COL9A1-205ENST00000447041 AKAP2Q9Y2D5 859 aa22.54■■□□□ 1.2
COL9A1-205ENST00000447041 PDS5AQ29RF7 1337 aaKnown RBP22.54■■□□□ 1.2
COL9A1-205ENST00000447041 INPP5BP32019 993 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 CAP1Q01518 475 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 ZKSCAN2Q63HK3 967 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 ERO1BQ86YB8 467 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 ZGPATQ8N5A5 531 aaKnown RBP22.53■■□□□ 1.2
COL9A1-205ENST00000447041 ERO1AQ96HE7 468 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 ABCF2Q9UG63 623 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 GAKO14976 1311 aa22.53■■□□□ 1.2
COL9A1-205ENST00000447041 RFX7Q2KHR2 1363 aa22.52■■□□□ 1.2
COL9A1-205ENST00000447041 IRF6O14896 467 aa22.52■■□□□ 1.2
COL9A1-205ENST00000447041 MVPQ14764 893 aaKnown RBP22.52■■□□□ 1.2
COL9A1-205ENST00000447041 TAF1CQ15572 869 aaPredicted RBP22.52■■□□□ 1.2
COL9A1-205ENST00000447041 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
COL9A1-205ENST00000447041 DZIP1Q86YF9 867 aaKnown RBP22.52■■□□□ 1.2
COL9A1-205ENST00000447041 ZFPM1Q8IX07 1006 aa22.52■■□□□ 1.2
COL9A1-205ENST00000447041 NEUROD6Q96NK8 337 aa22.52■■□□□ 1.2
COL9A1-205ENST00000447041 SP3Q02447 781 aa22.51■■□□□ 1.19
COL9A1-205ENST00000447041 PPIL2Q13356 520 aa22.5■■□□□ 1.19
COL9A1-205ENST00000447041 PI16Q6UXB8 463 aa22.5■■□□□ 1.19
COL9A1-205ENST00000447041 ZFYVE28Q9HCC9 887 aa22.5■■□□□ 1.19
COL9A1-205ENST00000447041 ATRNL1Q5VV63 1379 aa22.5■■□□□ 1.19
COL9A1-205ENST00000447041 CETPP11597 493 aa22.49■■□□□ 1.19
COL9A1-205ENST00000447041 RGS3P49796 1198 aa22.49■■□□□ 1.19
COL9A1-205ENST00000447041 HMG20BQ9P0W2 317 aa22.49■■□□□ 1.19
COL9A1-205ENST00000447041 ZNF112Q9UJU3 913 aa22.49■■□□□ 1.19
COL9A1-205ENST00000447041 ZSWIM8A7E2V4 1837 aa22.49■■□□□ 1.19
COL9A1-205ENST00000447041 BTBD19C9JJ37 291 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 G3BP1Q13283 466 aaKnown RBP eCLIP22.48■■□□□ 1.19
COL9A1-205ENST00000447041 SNAPC2Q13487 334 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 IDI2Q9BXS1 227 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 C1orf115Q9H7X2 142 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 EFCC1Q9HA90 598 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 PTPN22Q9Y2R2 807 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 MROH7-TTC4A0A0A0MT08 1334 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 CENPFP49454 3210 aa22.48■■□□□ 1.19
COL9A1-205ENST00000447041 BTDP43251 543 aa22.47■■□□□ 1.19
COL9A1-205ENST00000447041 MECOMQ03112 1051 aa22.47■■□□□ 1.19
COL9A1-205ENST00000447041 PPATQ06203 517 aa22.47■■□□□ 1.19
COL9A1-205ENST00000447041 SPTY2D1Q68D10 685 aaPredicted RBP22.47■■□□□ 1.19
COL9A1-205ENST00000447041 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
COL9A1-205ENST00000447041 ZNF384Q8TF68 577 aa22.47■■□□□ 1.19
COL9A1-205ENST00000447041 DDX4Q9NQI0 724 aaKnown RBP22.47■■□□□ 1.19
COL9A1-205ENST00000447041 WDHD1O75717 1129 aaPredicted RBP22.46■■□□□ 1.19
COL9A1-205ENST00000447041 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
COL9A1-205ENST00000447041 POLA2Q14181 598 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 NOL9Q5SY16 702 aaKnown RBP22.46■■□□□ 1.19
COL9A1-205ENST00000447041 GORABQ5T7V8 394 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 ERICH6Q7L0X2 663 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 SH3BP5LQ7L8J4 393 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 SLF2Q8IX21 1173 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 FTSJ3Q8IY81 847 aaKnown RBP22.46■■□□□ 1.19
COL9A1-205ENST00000447041 SPATA5Q8NB90 893 aa22.46■■□□□ 1.19
COL9A1-205ENST00000447041 FAM163AQ96GL9 167 aaPredicted RBP22.46■■□□□ 1.19
COL9A1-205ENST00000447041 ENTPD3O75355 529 aa22.45■■□□□ 1.18
COL9A1-205ENST00000447041 SLURP2P0DP57 97 aa22.45■■□□□ 1.18
COL9A1-205ENST00000447041 RLBP1P12271 317 aa22.45■■□□□ 1.18
COL9A1-205ENST00000447041 PICALMQ13492 652 aa22.45■■□□□ 1.18
COL9A1-205ENST00000447041 TBC1D9Q6ZT07 1266 aa22.45■■□□□ 1.18
COL9A1-205ENST00000447041 MCAMP43121 646 aa22.44■■□□□ 1.18
COL9A1-205ENST00000447041 MAST2Q6P0Q8 1798 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms