RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 UBXN4Q92575 508 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 RNPC3Q96LT9 517 aaKnown RBP9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 GORASP1Q9BQQ3 440 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 VCX3BQ9H321 246 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 NRDE2Q9H7Z3 1164 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 TTLL3Q9Y4R7 772 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 GOLGA8AA7E2F4 631 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 CD53P19397 219 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 PAPOLAP51003 745 aaKnown RBP9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 BIRC3Q13489 604 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 SEPT2Q15019 361 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 SEPT7Q16181 437 aaKnown RBP9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 NANOGNBQ7Z5D8 188 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 NLRP2Q9NX02 1062 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 PCSK1NQ9UHG2 260 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 DISP1Q96F81 1524 aa9.83□□□□□ -0.84
MCF2L2-203ENST00000447025 SART1O43290 800 aaKnown RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 ATP9BO43861 1147 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 TBCAO75347 108 aaKnown RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 VAMP4O75379 141 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 SKAP2O75563 359 aaPredicted RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 B3GALNT1O75752 331 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 STAM2O75886 525 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 DESP17661 470 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 CCNCP24863 283 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 KIF11P52732 1056 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 CCDC170Q8IYT3 715 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 GBP7Q8N8V2 638 aaPredicted RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 ARGLU1Q9NWB6 273 aaPredicted RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 ZNHIT6Q9NWK9 470 aaKnown RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 ADAM21Q9UKJ8 722 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 GLI2P10070 1586 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 ZEB2O60315 1214 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 HSPA1AP0DMV8 641 aaKnown RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 HSPA1BP0DMV9 641 aaKnown RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 FERP16591 822 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 PDE6BP35913 854 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 RASA2Q15283 850 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 NAA16Q6N069 864 aaPredicted RBP9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 AS3MTQ9HBK9 375 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 SLAIN2Q9P270 581 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 TMED5Q9Y3A6 229 aa9.82□□□□□ -0.84
MCF2L2-203ENST00000447025 OAS2P29728 719 aaKnown RBP9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 PHEXP78562 749 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 THOC7Q6I9Y2 204 aaKnown RBP9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 TTLL7Q6ZT98 887 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 ATRIPQ8WXE1 791 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 NAP1L3Q99457 506 aaPredicted RBP9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 RCAN3Q9UKA8 241 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 KIF3BO15066 747 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 NAA25Q14CX7 972 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 SUN5Q8TC36 379 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 ZFPM2Q8WW38 1151 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 HELLSQ9NRZ9 838 aa9.81□□□□□ -0.84
MCF2L2-203ENST00000447025 CYP1A2P05177 515 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 MCM3P25205 808 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 CUL3Q13618 768 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 MUM1Q2TAK8 710 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 CCDC144BQ3MJ40 725 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 GALNT17Q6IS24 598 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 NT5DC4Q86YG4 428 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 CCAR1Q8IX12 1150 aaKnown RBP9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 LILRB2Q8N423 598 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 LRRC45Q96CN5 670 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 MRPL46Q9H2W6 279 aaKnown RBP9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 SFMBT1Q9UHJ3 866 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 PRR12Q9ULL5 1215 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 LSM1O15116 133 aaKnown RBP9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 HOXA2O43364 376 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 MAN1A1P33908 653 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 FBXW10Q5XX13 1052 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 PCDH18Q9HCL0 1135 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 XPO7Q9UIA9 1087 aaKnown RBP9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 TIMM22Q9Y584 194 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 GMEB1Q9Y692 573 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
MCF2L2-203ENST00000447025 ERICH2A1L162 156 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 EVI5O60447 810 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 SEC24BO95487 1268 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 IDO1P14902 403 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 CCDC122Q5T0U0 273 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 CREB3L3Q68CJ9 461 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 KANK3Q6NY19 840 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 BPHLQ86WA6 291 aaPredicted RBP9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 SLC15A3Q8IY34 581 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 GCC1Q96CN9 775 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 MRRFQ96E11 262 aaKnown RBP9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 UROC1Q96N76 676 aa9.79□□□□□ -0.84
MCF2L2-203ENST00000447025 NACAP1Q9BZK3 213 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms