RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 NALCNQ8IZF0 1738 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 MMP20O60882 483 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 PSAPP07602 524 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 SIK1P57059 783 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 NSUN5Q96P11 429 aaKnown RBP11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 MRPL18Q9H0U6 180 aaKnown RBP11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 KCNMB2Q9Y691 235 aa11.16□□□□□ -0.62
SMARCE1-206ENST00000447024 PHLPP1O60346 1717 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 ASXL1Q8IXJ9 1541 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 C1orf167Q5SNV9 1468 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 ALX3O95076 343 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 MED1Q15648 1581 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-206ENST00000447024 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 GHRHP01286 108 aa11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 IL22RA1Q8N6P7 574 aa11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 STK26Q9P289 416 aa11.14□□□□□ -0.63
SMARCE1-206ENST00000447024 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 A6NJR5 290 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 SOX18P35713 384 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 FKBP5Q13451 457 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 COX20Q5RI15 118 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 LCE3BQ5TA77 95 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 COL16A1Q07092 1604 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-206ENST00000447024 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
SMARCE1-206ENST00000447024 FSTP19883 344 aa11.12□□□□□ -0.63
SMARCE1-206ENST00000447024 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
SMARCE1-206ENST00000447024 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-206ENST00000447024 NHSL1Q5SYE7 1610 aa11.11□□□□□ -0.63
SMARCE1-206ENST00000447024 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
SMARCE1-206ENST00000447024 RBSNQ9H1K0 784 aa11.11□□□□□ -0.63
SMARCE1-206ENST00000447024 EIF3AQ14152 1382 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-206ENST00000447024 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
SMARCE1-206ENST00000447024 PRAM1Q96QH2 718 aa11.1□□□□□ -0.63
SMARCE1-206ENST00000447024 POGKQ9P215 609 aa11.1□□□□□ -0.63
SMARCE1-206ENST00000447024 TRIM33Q9UPN9 1127 aa11.1□□□□□ -0.63
SMARCE1-206ENST00000447024 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
SMARCE1-206ENST00000447024 TRIP4Q15650 581 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-206ENST00000447024 Q6ZS46 218 aa11.09□□□□□ -0.63
SMARCE1-206ENST00000447024 MAP4K3Q8IVH8 894 aa11.09□□□□□ -0.63
SMARCE1-206ENST00000447024 ETFBKMTQ8IXQ9 262 aa11.09□□□□□ -0.63
SMARCE1-206ENST00000447024 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
SMARCE1-206ENST00000447024 ADGRB2O60241 1585 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 CDCA8Q53HL2 280 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 NLRP13Q86W25 1043 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 AGGF1Q8N302 714 aaeCLIP11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 PRIMPOLQ96LW4 560 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 NOVA2Q9UNW9 492 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-206ENST00000447024 FMN2Q9NZ56 1722 aa11.07□□□□□ -0.64
SMARCE1-206ENST00000447024 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
SMARCE1-206ENST00000447024 ORAI2Q96SN7 254 aa11.07□□□□□ -0.64
SMARCE1-206ENST00000447024 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
SMARCE1-206ENST00000447024 KIF1AQ12756 1690 aa11.06□□□□□ -0.64
SMARCE1-206ENST00000447024 RFX1P22670 979 aa11.06□□□□□ -0.64
SMARCE1-206ENST00000447024 SSTR4P31391 388 aa11.06□□□□□ -0.64
SMARCE1-206ENST00000447024 SAP130Q9H0E3 1048 aa11.06□□□□□ -0.64
SMARCE1-206ENST00000447024 GLB1P16278 677 aa11.05□□□□□ -0.64
SMARCE1-206ENST00000447024 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-206ENST00000447024 PRMT3O60678 531 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 FAM26DQ5JW98 314 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 CACTIN-AS1Q8N1I8 211 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 MUC3BQ9H195 1237 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
SMARCE1-206ENST00000447024 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 BRD2P25440 801 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 CD97P48960 835 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 OCLNQ16625 522 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 C16orf46Q6P387 395 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 GALNT11Q8NCW6 608 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 RAXQ9Y2V3 346 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 PPME1Q9Y570 386 aa11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-206ENST00000447024 PXDNQ92626 1479 aa11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 SAFB2Q14151 953 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 MEX3CQ5U5Q3 659 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 ZNF772Q68DY9 489 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 KRTAP19-1Q8IUB9 90 aa11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 OR13H1Q8NG92 308 aa11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.65
SMARCE1-206ENST00000447024 LINC01387J3KSC0 135 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 WISP1O95388 367 aa11.01□□□□□ -0.65
SMARCE1-206ENST00000447024 ATP11AP98196 1134 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms