RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 FAM155AB1AL88 458 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 EGFRP00533 1210 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 EIF2S2P20042 333 aaKnown RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 GRAPQ13588 217 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 TBC1D10BQ4KMP7 808 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 RGMBQ6NW40 437 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 KRT26Q7Z3Y9 468 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 HELBQ8NG08 1087 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 GRAPLQ8TC17 118 aaPredicted RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 SAGE1Q9NXZ1 904 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 TRMT112Q9UI30 125 aaKnown RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 TSPYL4Q9UJ04 414 aa7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 DDX60Q8IY21 1712 aaKnown RBP7.63□□□□□ -1.19
HMGN1P36-201ENST00000446623 AKAP11Q9UKA4 1901 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 ADM5C9JUS6 153 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 J3QL48 77 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 PSMD14O00487 310 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 TRPA1O75762 1119 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 SOX10P56693 466 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 KIF23Q02241 960 aaPredicted RBP7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 CTDSPL2Q05D32 466 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 HSP90AB3PQ58FF7 597 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 COPS6Q7L5N1 327 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 TMC4Q7Z404 712 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 EHBP1Q8NDI1 1231 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 SNIP1Q8TAD8 396 aaKnown RBP7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 DPF2Q92785 391 aa7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 GBA2Q9HCG7 927 aaPredicted RBP7.62□□□□□ -1.19
HMGN1P36-201ENST00000446623 RTL9Q8NET4 1388 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 COL4A1P02462 1669 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 MAPK8IP3Q9UPT6 1336 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 F12P00748 615 aaPredicted RBP7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 AIMP1Q12904 312 aaKnown RBP7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 TCIRG1Q13488 830 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 WASHC4Q2M389 1173 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 C2orf69Q8N8R5 385 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 DBNDD1Q9H9R9 158 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 KCNQ5Q9NR82 932 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 RNF186Q9NXI6 227 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 CEP290O15078 2479 aa7.61□□□□□ -1.19
HMGN1P36-201ENST00000446623 SCN9AQ15858 1988 aa7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 SMPD1P17405 629 aa7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 RPS12P25398 132 aaKnown RBP7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 GPSM2P81274 684 aa7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 ZNF511Q8NB15 262 aa7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 CELF1Q92879 486 aaKnown RBP7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 DCPSQ96C86 337 aaKnown RBP7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 POLLQ9UGP5 575 aa7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
HMGN1P36-201ENST00000446623 ASTN2O75129 1339 aaPredicted RBP7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 ECE2O60344 883 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 SF3B3Q15393 1217 aaKnown RBP7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 KIF4BQ2VIQ3 1234 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 CTU1Q7Z7A3 348 aaKnown RBP7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 LRRN4Q8WUT4 740 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 CDCA5Q96FF9 252 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 CSRNP1Q96S65 589 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 EYA3Q99504 573 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 PNNQ9H307 717 aaKnown RBP7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 BABAM1Q9NWV8 329 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 GGA3Q9NZ52 723 aa7.59□□□□□ -1.19
HMGN1P36-201ENST00000446623 AP1G2O75843 785 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 RIPK4P57078 832 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 KRT24Q2M2I5 525 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 RASAL3Q86YV0 1011 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 TBC1D16Q8TBP0 767 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 FAM89AQ96GI7 184 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 ISCA1Q9BUE6 129 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 AAASQ9NRG9 546 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 CHPF2Q9P2E5 772 aa7.58□□□□□ -1.2
HMGN1P36-201ENST00000446623 PSME4Q14997 1843 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 PAPPA2Q9BXP8 1791 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 SIAH2O43255 324 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 VIL1P09327 827 aaKnown RBP7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 ZNF280AP59817 542 aaPredicted RBP7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 RPS8P62241 208 aaKnown RBP7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 FKBP1BP68106 108 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 AGERQ15109 404 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 ANGEL2Q5VTE6 544 aaKnown RBP7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 PLBD2Q8NHP8 589 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 HPS1Q92902 700 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 ZNF609O15014 1411 aa7.57□□□□□ -1.2
HMGN1P36-201ENST00000446623 CHL1O00533 1208 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 UFL1O94874 794 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 TMPOP42166 694 aaKnown RBP7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 SCARF1Q14162 830 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 ZC3H12CQ9C0D7 883 aaKnown RBP7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 PODXL2Q9NZ53 605 aa7.56□□□□□ -1.2
HMGN1P36-201ENST00000446623 DACH1Q9UI36 760 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms