RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 MCAMP43121 646 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 TRDNQ13061 729 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
ERCC3-203ENST00000445889 NOL10Q9BSC4 688 aaKnown RBP16.39■□□□□ 0.21
ERCC3-203ENST00000445889 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-203ENST00000445889 H2AFXP16104 143 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-203ENST00000445889 EVCP57679 992 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 BRAPQ7Z569 592 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 APPBP2Q92624 585 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 WDR24Q96S15 920 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 INTS13Q9NVM9 706 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 COBLO75128 1261 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 MYL5Q02045 173 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 RRP12Q5JTH9 1297 aaKnown RBP16.39■□□□□ 0.21
ERCC3-203ENST00000445889 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
ERCC3-203ENST00000445889 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 KARSQ15046 597 aaKnown RBP16.38■□□□□ 0.21
ERCC3-203ENST00000445889 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 OVOS2A0A0G2JMS6 1433 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 A0A0U1RQJ8 604 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 RANBP6O60518 1105 aaKnown RBP16.38■□□□□ 0.21
ERCC3-203ENST00000445889 PNMA6AP0CW24 399 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-203ENST00000445889 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
ERCC3-203ENST00000445889 PLA2G4AP47712 749 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 GNG11P61952 73 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 CTDSPL2Q05D32 466 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 REXO1L1PQ8IX06 675 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 ATRIPQ8WXE1 791 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
ERCC3-203ENST00000445889 PRR29P0C7W0 189 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 GYS2P54840 703 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 PTPAQ15257 358 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 CPLX3Q8WVH0 158 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 BPIFA3Q9BQP9 254 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 KCND1Q9NSA2 647 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 KCNH3Q9ULD8 1083 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 ANGEL1Q9UNK9 670 aaKnown RBP16.37■□□□□ 0.21
ERCC3-203ENST00000445889 MYH15Q9Y2K3 1946 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 CASP1P29466 404 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 FMR1Q06787 632 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERCC3-203ENST00000445889 MTF1Q14872 753 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
ERCC3-203ENST00000445889 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
ERCC3-203ENST00000445889 APOA5Q6Q788 366 aa16.36■□□□□ 0.21
ERCC3-203ENST00000445889 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
ERCC3-203ENST00000445889 IFIT5Q13325 482 aaKnown RBP16.36■□□□□ 0.21
ERCC3-203ENST00000445889 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
ERCC3-203ENST00000445889 OLFM4Q6UX06 510 aa16.36■□□□□ 0.21
ERCC3-203ENST00000445889 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
ERCC3-203ENST00000445889 VWA3AA6NCI4 1184 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 POLR2DO15514 142 aaKnown RBP16.35■□□□□ 0.21
ERCC3-203ENST00000445889 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TMCO3Q6UWJ1 677 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 SAMSN1Q9NSI8 373 aaKnown RBP16.35■□□□□ 0.21
ERCC3-203ENST00000445889 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-203ENST00000445889 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 KLHL10Q6JEL2 608 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 GREM2Q9H772 168 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TUBE1Q9UJT0 475 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 PARP3Q9Y6F1 533 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 CCDC66A2RUB6 948 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 NR5A1Q13285 461 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TMEM67Q5HYA8 995 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 HPSEQ9Y251 543 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 NFE2L3Q9Y4A8 694 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
ERCC3-203ENST00000445889 IKBKBO14920 756 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 ZBTB43O43298 467 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 STX17P56962 302 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
ERCC3-203ENST00000445889 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 FAM217BQ9NTX9 383 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-203ENST00000445889 SASH3O75995 380 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 PHKA1P46020 1223 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 SERTAD1Q9UHV2 236 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 TACC3Q9Y6A5 838 aa16.34■□□□□ 0.21
ERCC3-203ENST00000445889 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.21
ERCC3-203ENST00000445889 SH2B2O14492 632 aaPredicted RBP16.33■□□□□ 0.21
ERCC3-203ENST00000445889 TRIM29Q14134 588 aa16.33■□□□□ 0.21
ERCC3-203ENST00000445889 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.21
ERCC3-203ENST00000445889 BAG1Q99933 345 aaPredicted RBP16.33■□□□□ 0.21
ERCC3-203ENST00000445889 LZTFL1Q9NQ48 299 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms