RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MTX1Q13505 466 aa26.09■■□□□ 1.77
VSX1-206ENST00000444511 CCL15Q16663 113 aa26.09■■□□□ 1.77
VSX1-206ENST00000444511 CCDC102BQ68D86 513 aa26.09■■□□□ 1.77
VSX1-206ENST00000444511 SPDYE5A6NIY4 337 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 CDC42EP5Q6NZY7 148 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 FAM151AQ8WW52 585 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 BRI3BPQ8WY22 251 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 ERO1AQ96HE7 468 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 AKAP2Q9Y2D5 859 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 TRIM17Q9Y577 477 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 SNCAIPQ9Y6H5 919 aa26.08■■□□□ 1.77
VSX1-206ENST00000444511 TIMM10P62072 90 aa26.07■■□□□ 1.76
VSX1-206ENST00000444511 TCP10Q12799 353 aa26.07■■□□□ 1.76
VSX1-206ENST00000444511 ZGPATQ8N5A5 531 aaKnown RBP26.07■■□□□ 1.76
VSX1-206ENST00000444511 ZKSCAN4Q969J2 545 aaPredicted RBP26.07■■□□□ 1.76
VSX1-206ENST00000444511 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
VSX1-206ENST00000444511 TNNQ9UQP3 1299 aa26.07■■□□□ 1.76
VSX1-206ENST00000444511 GNAI2P04899 355 aa26.06■■□□□ 1.76
VSX1-206ENST00000444511 TFCP2Q12800 502 aa26.06■■□□□ 1.76
VSX1-206ENST00000444511 ERO1BQ86YB8 467 aa26.06■■□□□ 1.76
VSX1-206ENST00000444511 ZNF341Q9BYN7 854 aa26.06■■□□□ 1.76
VSX1-206ENST00000444511 USP40Q9NVE5 1235 aa26.06■■□□□ 1.76
VSX1-206ENST00000444511 A0A1B0GUL7 405 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 ZBTB22O15209 634 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 RASGRF1Q13972 1273 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 MIGA2Q7L4E1 593 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 OTOP1Q7RTM1 612 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 CD99L2Q8TCZ2 262 aa26.05■■□□□ 1.76
VSX1-206ENST00000444511 SP3Q02447 781 aa26.04■■□□□ 1.76
VSX1-206ENST00000444511 NFIAQ12857 509 aa26.04■■□□□ 1.76
VSX1-206ENST00000444511 MVPQ14764 893 aaKnown RBP26.04■■□□□ 1.76
VSX1-206ENST00000444511 TAF1CQ15572 869 aaPredicted RBP26.04■■□□□ 1.76
VSX1-206ENST00000444511 XAGE2Q96GT9 111 aa26.04■■□□□ 1.76
VSX1-206ENST00000444511 ZFYVE28Q9HCC9 887 aa26.04■■□□□ 1.76
VSX1-206ENST00000444511 ABCF2Q9UG63 623 aa26.04■■□□□ 1.76
VSX1-206ENST00000444511 CETPP11597 493 aa26.03■■□□□ 1.76
VSX1-206ENST00000444511 HNRNPUQ00839 825 aaKnown RBP eCLIP26.03■■□□□ 1.76
VSX1-206ENST00000444511 DZIP1Q86YF9 867 aaKnown RBP26.03■■□□□ 1.76
VSX1-206ENST00000444511 WDHD1O75717 1129 aaPredicted RBP26.02■■□□□ 1.76
VSX1-206ENST00000444511 SNAPC2Q13487 334 aa26.02■■□□□ 1.76
VSX1-206ENST00000444511 ZKSCAN2Q63HK3 967 aa26.02■■□□□ 1.76
VSX1-206ENST00000444511 FAM43AQ8N2R8 423 aa26.02■■□□□ 1.76
VSX1-206ENST00000444511 NEUROD6Q96NK8 337 aa26.02■■□□□ 1.76
VSX1-206ENST00000444511 PDS5AQ29RF7 1337 aaKnown RBP26.02■■□□□ 1.76
VSX1-206ENST00000444511 IRF6O14896 467 aa26.01■■□□□ 1.75
VSX1-206ENST00000444511 PPIL2Q13356 520 aa26.01■■□□□ 1.75
VSX1-206ENST00000444511 SPTY2D1Q68D10 685 aaPredicted RBP26.01■■□□□ 1.75
VSX1-206ENST00000444511 SLF2Q8IX21 1173 aa26.01■■□□□ 1.75
VSX1-206ENST00000444511 EFCC1Q9HA90 598 aa26.01■■□□□ 1.75
VSX1-206ENST00000444511 FAM198AQ9UFP1 575 aa26.01■■□□□ 1.75
VSX1-206ENST00000444511 INPP5BP32019 993 aa26■■□□□ 1.75
VSX1-206ENST00000444511 GORABQ5T7V8 394 aa26■■□□□ 1.75
VSX1-206ENST00000444511 MIER1Q8N108 512 aa26■■□□□ 1.75
VSX1-206ENST00000444511 GAKO14976 1311 aa25.99■■□□□ 1.75
VSX1-206ENST00000444511 PNMA6EA0A0J9YXQ4 647 aa25.99■■□□□ 1.75
VSX1-206ENST00000444511 PPATQ06203 517 aa25.99■■□□□ 1.75
VSX1-206ENST00000444511 G3BP1Q13283 466 aaKnown RBP eCLIP25.99■■□□□ 1.75
VSX1-206ENST00000444511 TMEM57Q8N5G2 664 aa25.99■■□□□ 1.75
VSX1-206ENST00000444511 ZNF112Q9UJU3 913 aa25.98■■□□□ 1.75
VSX1-206ENST00000444511 PTPN22Q9Y2R2 807 aa25.98■■□□□ 1.75
VSX1-206ENST00000444511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.98■■□□□ 1.75
VSX1-206ENST00000444511 BTBD19C9JJ37 291 aa25.97■■□□□ 1.75
VSX1-206ENST00000444511 RGS3P49796 1198 aa25.97■■□□□ 1.75
VSX1-206ENST00000444511 ARHGEF6Q15052 776 aa25.97■■□□□ 1.75
VSX1-206ENST00000444511 ZFPM1Q8IX07 1006 aa25.97■■□□□ 1.75
VSX1-206ENST00000444511 IDI2Q9BXS1 227 aa25.97■■□□□ 1.75
VSX1-206ENST00000444511 ZCCHC17Q9NP64 241 aaKnown RBP25.97■■□□□ 1.75
VSX1-206ENST00000444511 ENTPD3O75355 529 aa25.96■■□□□ 1.75
VSX1-206ENST00000444511 DIEXFQ68CQ4 756 aaKnown RBP25.96■■□□□ 1.75
VSX1-206ENST00000444511 ERICH6Q7L0X2 663 aa25.96■■□□□ 1.75
VSX1-206ENST00000444511 FAM163AQ96GL9 167 aaPredicted RBP25.96■■□□□ 1.75
VSX1-206ENST00000444511 BTDP43251 543 aa25.95■■□□□ 1.74
VSX1-206ENST00000444511 ZSCAN29Q8IWY8 852 aaPredicted RBP25.95■■□□□ 1.74
VSX1-206ENST00000444511 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.95■■□□□ 1.74
VSX1-206ENST00000444511 HMG20BQ9P0W2 317 aa25.95■■□□□ 1.74
VSX1-206ENST00000444511 MROH7-TTC4A0A0A0MT08 1334 aa25.94■■□□□ 1.74
VSX1-206ENST00000444511 MECOMQ03112 1051 aa25.94■■□□□ 1.74
VSX1-206ENST00000444511 NOL9Q5SY16 702 aaKnown RBP25.94■■□□□ 1.74
VSX1-206ENST00000444511 FTSJ3Q8IY81 847 aaKnown RBP25.94■■□□□ 1.74
VSX1-206ENST00000444511 SPATA5Q8NB90 893 aa25.94■■□□□ 1.74
VSX1-206ENST00000444511 TLR2O60603 784 aa25.93■■□□□ 1.74
VSX1-206ENST00000444511 CAP1Q01518 475 aa25.93■■□□□ 1.74
VSX1-206ENST00000444511 PICALMQ13492 652 aa25.92■■□□□ 1.74
VSX1-206ENST00000444511 PI16Q6UXB8 463 aa25.92■■□□□ 1.74
VSX1-206ENST00000444511 KCNH4Q9UQ05 1017 aa25.92■■□□□ 1.74
VSX1-206ENST00000444511 RFX7Q2KHR2 1363 aa25.92■■□□□ 1.74
VSX1-206ENST00000444511 MYH2Q9UKX2 1941 aa25.92■■□□□ 1.74
VSX1-206ENST00000444511 AK9Q5TCS8 1911 aa25.91■■□□□ 1.74
VSX1-206ENST00000444511 ARID4AP29374 1257 aaPredicted RBP25.91■■□□□ 1.74
VSX1-206ENST00000444511 GSTO1P78417 241 aa25.91■■□□□ 1.74
VSX1-206ENST00000444511 OS9Q13438 667 aaPredicted RBP25.91■■□□□ 1.74
VSX1-206ENST00000444511 ATRNL1Q5VV63 1379 aa25.91■■□□□ 1.74
VSX1-206ENST00000444511 GPR75-ASB3A0A0A6YYF3 556 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 LDHCP07864 332 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 UQCRFS1P1P0C7P4 283 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 POLA2Q14181 598 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 KIF22Q14807 665 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 TBC1D9Q6ZT07 1266 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 SH3BP5LQ7L8J4 393 aa25.9■■□□□ 1.74
VSX1-206ENST00000444511 ANKRD23Q86SG2 305 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms