RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
TREX1-202ENST00000444177 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
TREX1-202ENST00000444177 A0A1B0GUL7 405 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 TESPA1A2RU30 521 aaPredicted RBP17.29■□□□□ 0.36
TREX1-202ENST00000444177 ZBTB22O15209 634 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 LDHBP07195 334 aaKnown RBP17.29■□□□□ 0.36
TREX1-202ENST00000444177 PRDX5P30044 214 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 ATP8B2P98198 1209 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 VGLL4Q14135 290 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 POLA2Q14181 598 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 CCDC102BQ68D86 513 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
TREX1-202ENST00000444177 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 PTPN18Q99952 460 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 DAGLAQ9Y4D2 1042 aa17.29■□□□□ 0.36
TREX1-202ENST00000444177 SALL1Q9NSC2 1324 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 MS4A4AQ96JQ5 239 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 DDX19BQ9UMR2 479 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 CSADQ9Y600 493 aa17.28■□□□□ 0.36
TREX1-202ENST00000444177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
TREX1-202ENST00000444177 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
TREX1-202ENST00000444177 CEP85Q6P2H3 762 aa17.27■□□□□ 0.36
TREX1-202ENST00000444177 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
TREX1-202ENST00000444177 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
TREX1-202ENST00000444177 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
TREX1-202ENST00000444177 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
TREX1-202ENST00000444177 GTF2A2P52657 109 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 SOX10P56693 466 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 NFIAQ12857 509 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 CRHR2Q13324 411 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 DCAF15Q66K64 600 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 FBXO46Q6PJ61 603 aaPredicted RBP17.25■□□□□ 0.35
TREX1-202ENST00000444177 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
TREX1-202ENST00000444177 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
TREX1-202ENST00000444177 CCL15-CCL14A0A0B4J2E2 113 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 TCP10Q12799 353 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 CCL15Q16663 113 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 ZGPATQ8N5A5 531 aaKnown RBP17.24■□□□□ 0.35
TREX1-202ENST00000444177 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
TREX1-202ENST00000444177 OTOFQ9HC10 1997 aa17.23■□□□□ 0.35
TREX1-202ENST00000444177 TNNI3KQ59H18 835 aa17.23■□□□□ 0.35
TREX1-202ENST00000444177 FAM198AQ9UFP1 575 aa17.23■□□□□ 0.35
TREX1-202ENST00000444177 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
TREX1-202ENST00000444177 FPGT-TNNI3KV9GXZ4 949 aa17.23■□□□□ 0.35
TREX1-202ENST00000444177 RPAP1Q9BWH6 1393 aaPredicted RBP17.23■□□□□ 0.35
TREX1-202ENST00000444177 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
TREX1-202ENST00000444177 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
TREX1-202ENST00000444177 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
TREX1-202ENST00000444177 ZFPM1Q8IX07 1006 aa17.22■□□□□ 0.35
TREX1-202ENST00000444177 FAM163AQ96GL9 167 aaPredicted RBP17.22■□□□□ 0.35
TREX1-202ENST00000444177 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
TREX1-202ENST00000444177 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
TREX1-202ENST00000444177 TRIM17Q9Y577 477 aa17.22■□□□□ 0.35
TREX1-202ENST00000444177 PDE4DIPQ5VU43 2346 aa17.22■□□□□ 0.35
TREX1-202ENST00000444177 IRF6O14896 467 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 CETPP11597 493 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 INPP5BP32019 993 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 SP3Q02447 781 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 OTOP1Q7RTM1 612 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
TREX1-202ENST00000444177 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 ERO1AQ96HE7 468 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 ZNF112Q9UJU3 913 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.35
TREX1-202ENST00000444177 GAKO14976 1311 aa17.21■□□□□ 0.34
TREX1-202ENST00000444177 LAMB1P07942 1786 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 PPIL2Q13356 520 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 SNAPC2Q13487 334 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
TREX1-202ENST00000444177 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 CD99L2Q8TCZ2 262 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 IDI2Q9BXS1 227 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 ZFYVE28Q9HCC9 887 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 HMG20BQ9P0W2 317 aa17.2■□□□□ 0.34
TREX1-202ENST00000444177 HMMRO75330 724 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 ENTPD3O75355 529 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 RGS3P49796 1198 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 PPATQ06203 517 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 TTC39AQ5SRH9 613 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
TREX1-202ENST00000444177 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
TREX1-202ENST00000444177 DBNDD2Q9BQY9 259 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms