RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 PPIP5K1Q6PFW1 1433 aa5.55□□□□□ -1.52
PRKD3-204ENST00000443977 MYO5BQ9ULV0 1848 aa5.55□□□□□ -1.52
PRKD3-204ENST00000443977 CDC42BPGQ6DT37 1551 aa5.55□□□□□ -1.52
PRKD3-204ENST00000443977 USP17L3A6NCW0 530 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 USP17L4A6NCW7 530 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 ATP9BO43861 1147 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
PRKD3-204ENST00000443977 HSP90AB1P08238 724 aaKnown RBP5.54□□□□□ -1.52
PRKD3-204ENST00000443977 PRKAR2BP31323 418 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 MCM4P33991 863 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 RBM25P49756 843 aaKnown RBP5.54□□□□□ -1.52
PRKD3-204ENST00000443977 MFAP1P55081 439 aaKnown RBP5.54□□□□□ -1.52
PRKD3-204ENST00000443977 GTF2IP78347 998 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 USP17L2Q6R6M4 530 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 USP17L1Q7RTZ2 530 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 TMEM57Q8N5G2 664 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 COG3Q96JB2 828 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 ZNF358Q9NW07 568 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 PCDHGA11Q9Y5H2 935 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 ALKQ9UM73 1620 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 EDC4Q6P2E9 1401 aaKnown RBP5.54□□□□□ -1.52
PRKD3-204ENST00000443977 REREQ9P2R6 1566 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 AATKQ6ZMQ8 1374 aa5.54□□□□□ -1.52
PRKD3-204ENST00000443977 COL3A1P02461 1466 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-204ENST00000443977 PALM3A6NDB9 673 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-204ENST00000443977 LZTS3O60299 673 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-204ENST00000443977 RFX1P22670 979 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 MRE11P49959 708 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 TYRO3Q06418 890 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 HIF1AQ16665 826 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 PSAPL1Q6NUJ1 521 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
PRKD3-204ENST00000443977 WFDC12Q8WWY7 111 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 ANP32BQ92688 251 aaKnown RBP5.53□□□□□ -1.52
PRKD3-204ENST00000443977 PNMA5Q96PV4 448 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 CHMP4AQ9BY43 222 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 PPP1R12CQ9BZL4 782 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 POLKQ9UBT6 870 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 AGLP35573 1532 aa5.53□□□□□ -1.52
PRKD3-204ENST00000443977 FAM135BQ49AJ0 1406 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 SFI1A8K8P3 1242 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 ZBTB7BO15156 539 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 HMMRO75330 724 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 VAMP4O75379 141 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 CDC45O75419 566 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 LMOD1P29536 600 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 AFF1P51825 1210 aaKnown RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 PSMA6P60900 246 aaKnown RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 PCSK7Q16549 785 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 TWISTNBQ3B726 338 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 PRR23CQ6ZRP0 262 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 RPAP2Q8IXW5 612 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 NFATC2IPQ8NCF5 419 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 MAFBQ9Y5Q3 323 aaPredicted RBP5.52□□□□□ -1.53
PRKD3-204ENST00000443977 ARHGEF40Q8TER5 1519 aa5.52□□□□□ -1.53
PRKD3-204ENST00000443977 NLRP1Q9C000 1473 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 CDK12Q9NYV4 1490 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-204ENST00000443977 RIMS2Q9UQ26 1411 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 PTCD1O75127 700 aaKnown RBP5.51□□□□□ -1.53
PRKD3-204ENST00000443977 SSTR4P31391 388 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 FBXO11Q86XK2 927 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 ZNF594Q96JF6 807 aaPredicted RBP5.51□□□□□ -1.53
PRKD3-204ENST00000443977 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 LNPKQ9C0E8 428 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 C1orf115Q9H7X2 142 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 DNAJB12Q9NXW2 375 aaKnown RBP5.51□□□□□ -1.53
PRKD3-204ENST00000443977 MKRN1Q9UHC7 482 aaKnown RBP5.51□□□□□ -1.53
PRKD3-204ENST00000443977 KIAA1024Q9UPX6 916 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 TNNQ9UQP3 1299 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 PIK3R4Q99570 1358 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 CD163L1Q9NR16 1453 aa5.51□□□□□ -1.53
PRKD3-204ENST00000443977 PTPRCP08575 1304 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 CPSF1Q10570 1443 aaKnown RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 PTCH1Q13635 1447 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 REC8O95072 547 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 ZNF853P0CG23 659 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 FSTP19883 344 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 NOS3P29474 1203 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 IL13P35225 146 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 HIRAP54198 1017 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 EPHA4P54764 986 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 CLDN10P78369 228 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 NUCB2P80303 420 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 RABEP1Q15276 862 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 TBCELQ5QJ74 424 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 MSL1Q68DK7 614 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 INTS3Q68E01 1043 aaKnown RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 IGF2-ASQ6U949 168 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 RTF1Q92541 710 aaKnown RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 NUDT16Q96DE0 195 aaKnown RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 TRIM44Q96DX7 344 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-204ENST00000443977 SUSD3Q96L08 255 aa5.5□□□□□ -1.53
PRKD3-204ENST00000443977 PHACTR1Q9C0D0 580 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms