RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 PRMT6Q96LA8 375 aaPredicted RBP16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 TDRD3Q9H7E2 651 aaKnown RBP16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 ARMT1Q9H993 441 aa16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 VEZTQ9HBM0 779 aa16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
TM9SF4-204ENST00000442842 WNT10BO00744 389 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 CDC45O75419 566 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 CACNB3P54284 484 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 LCORLQ8N3X6 602 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 MTMR14Q8NCE2 650 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 OSBP2Q969R2 916 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 GGA3Q9NZ52 723 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.2
TM9SF4-204ENST00000442842 GPR75-ASB3A0A0A6YYF3 556 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 CHMLP26374 656 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 SCN4AP35499 1836 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 HIRAP54198 1017 aaPredicted RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 PICALMQ13492 652 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 ANGEL2Q5VTE6 544 aaKnown RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 CDC42EP5Q6NZY7 148 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 FAM163AQ96GL9 167 aaPredicted RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 MRIQ9BWK5 157 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
TM9SF4-204ENST00000442842 AK9Q5TCS8 1911 aa16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 GPAA1O43292 621 aa16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 PNMA8AQ86V59 439 aaPredicted RBP16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 ZNF70Q9UC06 446 aaPredicted RBP16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 MYH7P12883 1935 aa16.31■□□□□ 0.2
TM9SF4-204ENST00000442842 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 PLCG2P16885 1265 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 USP5P45974 858 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 RHBDL3P58872 404 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 HELLSQ9NRZ9 838 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
TM9SF4-204ENST00000442842 PPP4CP60510 307 aa16.29■□□□□ 0.2
TM9SF4-204ENST00000442842 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
TM9SF4-204ENST00000442842 CRNKL1Q9BZJ0 848 aaKnown RBP16.29■□□□□ 0.2
TM9SF4-204ENST00000442842 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 RAD50Q92878 1312 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 PRKAB2O43741 272 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 TCP10Q12799 353 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 NFIAQ12857 509 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 MAPKAPK5Q8IW41 473 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 SDR42E1Q8WUS8 393 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 DCPSQ96C86 337 aaKnown RBP16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 IL25Q9H293 177 aa16.28■□□□□ 0.2
TM9SF4-204ENST00000442842 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 SLC4A8Q2Y0W8 1093 aa16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
TM9SF4-204ENST00000442842 FLT1P17948 1338 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 ADM5C9JUS6 153 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 APPP05067 770 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 TNNI2P48788 182 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 SULF1Q8IWU6 871 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 SAP30BPQ9UHR5 308 aaKnown RBP16.26■□□□□ 0.19
TM9SF4-204ENST00000442842 PITPNM2Q9BZ72 1349 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 KIF3CO14782 793 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 SGSM2O43147 1006 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 GNAT2P19087 354 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 TDO2P48775 406 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
TM9SF4-204ENST00000442842 ECM29Q5VYK3 1845 aa16.24■□□□□ 0.19
TM9SF4-204ENST00000442842 RASA3Q14644 834 aa16.24■□□□□ 0.19
TM9SF4-204ENST00000442842 KRT26Q7Z3Y9 468 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms