RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MFSD14BQ5SR56 506 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 IFNL3Q8IZI9 196 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 RIOK1Q9BRS2 568 aaKnown RBP9.56□□□□□ -0.88
CCDC39-201ENST00000442201 RTFDC1Q9BY42 306 aaPredicted RBP9.56□□□□□ -0.88
CCDC39-201ENST00000442201 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 DUOX1Q9NRD9 1551 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 GSG1L2A8MUP6 293 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 E7EWF7 191 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 C21orf2O43822 256 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 LDHCP07864 332 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 GTF2IP78347 998 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 DOK7Q18PE1 504 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 SUPT20HQ8NEM7 779 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 LIMCH1Q9UPQ0 1083 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
CCDC39-201ENST00000442201 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 PRKAB2O43741 272 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 TDO2P48775 406 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 ANKRD1Q15327 319 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 CCDC93Q567U6 631 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 STOX1Q6ZVD7 989 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 PODNQ7Z5L7 613 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 MYH7P12883 1935 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 KCNA3P22001 575 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 DYNLL1P63167 89 aaKnown RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 RGS22Q8NE09 1264 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 GTPBP4Q9BZE4 634 aaKnown RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 EPB41L4AQ9HCS5 686 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 FOXD4L1Q9NU39 408 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 RTKN2Q8IZC4 609 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 AATFQ9NY61 560 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC39-201ENST00000442201 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
CCDC39-201ENST00000442201 MMP14P50281 582 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 SLC20A2Q08357 652 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 GRIK5Q16478 980 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 RALYLQ86SE5 291 aaKnown RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 SLF2Q8IX21 1173 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 TCEANC2Q96MN5 208 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 CRNKL1Q9BZJ0 848 aaKnown RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 SUGT1Q9Y2Z0 365 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 BAG3O95817 575 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 TRDNQ13061 729 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 CUL4AQ13619 759 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 SDR42E1Q8WUS8 393 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 DBNDD1Q9H9R9 158 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 CHMP5Q9NZZ3 219 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 SLX4Q8IY92 1834 aa9.54□□□□□ -0.88
CCDC39-201ENST00000442201 MYO5AQ9Y4I1 1855 aaKnown RBP9.54□□□□□ -0.88
CCDC39-201ENST00000442201 KIAA2012Q0VF49 1180 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 DIXDC1Q155Q3 683 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 SOGA3Q5TF21 947 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 GIMAP6Q6P9H5 292 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 CERS3Q8IU89 383 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 CACNA1SQ13698 1873 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 SNED1Q8TER0 1413 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 SH2B1Q9NRF2 756 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 MROH7-TTC4A0A0A0MT08 1334 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 PPIP5K2O43314 1243 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 AOC3Q16853 763 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 INTS4Q96HW7 963 aaKnown RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
CCDC39-201ENST00000442201 ATP8A2Q9NTI2 1148 aa9.53□□□□□ -0.88
CCDC39-201ENST00000442201 ECE2O60344 883 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 PPP4CP60510 307 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
CCDC39-201ENST00000442201 TBC1D10CQ8IV04 446 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 PSMD1Q99460 953 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 MCM5P33992 734 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
CCDC39-201ENST00000442201 TOB2Q14106 344 aaPredicted RBP9.52□□□□□ -0.89
CCDC39-201ENST00000442201 Q6ZUG5 572 aa9.52□□□□□ -0.89
CCDC39-201ENST00000442201 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
CCDC39-201ENST00000442201 MYH13Q9UKX3 1938 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 DDIT3P35638 169 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 STRIP1Q5VSL9 837 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
CCDC39-201ENST00000442201 GPR75-ASB3A0A0A6YYF3 556 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 MINDY4BA8MYZ0 360 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 OFD1O75665 1012 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 PLCG2P16885 1265 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 PTGER2P43116 358 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 PPARAQ07869 468 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
CCDC39-201ENST00000442201 MB21D2Q8IYB1 491 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms