RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 TMCO5BA8MYB1 307 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
ATL1-202ENST00000441560 SSBP05455 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATL1-202ENST00000441560 TUBBP07437 444 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 MYL5Q02045 173 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 TBC1D25Q3MII6 688 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 RNF187Q5TA31 235 aaPredicted RBP11.18□□□□□ -0.62
ATL1-202ENST00000441560 TEX13AQ9BXU3 409 aaPredicted RBP11.18□□□□□ -0.62
ATL1-202ENST00000441560 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 ANKRD18BA2A2Z9 1011 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 CHL1O00533 1208 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 PFKFB2O60825 505 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 ZMYND10O75800 440 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 RPSAP08865 295 aaKnown RBP11.18□□□□□ -0.62
ATL1-202ENST00000441560 MTA1Q13330 715 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 E2F5Q15329 346 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 B4GALNT4Q76KP1 1039 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 CCDC148Q8NFR7 591 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 COG1Q8WTW3 980 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 FAM227BQ96M60 508 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 INTS13Q9NVM9 706 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 PIP4K2BP78356 416 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 NFXL1Q6ZNB6 911 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 SCLT1Q96NL6 688 aa11.18□□□□□ -0.62
ATL1-202ENST00000441560 ADGRB1O14514 1584 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 GLRX3O76003 335 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 EZRP15311 586 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 IL13P35225 146 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 WDR93Q6P2C0 686 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 PPP1R42Q7Z4L9 355 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 GSPT2Q8IYD1 628 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 SLC35F6Q8N357 371 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 SPDL1Q96EA4 605 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 CDC5LQ99459 802 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 G3BP2Q9UN86 482 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 NEDD4P46934 1319 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 PDHBP11177 359 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 GBP2P32456 591 aaPredicted RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 ARHGAP25P42331 645 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 ICA1Q05084 483 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
ATL1-202ENST00000441560 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.17□□□□□ -0.62
ATL1-202ENST00000441560 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 SETBP1Q9Y6X0 1596 aa11.17□□□□□ -0.62
ATL1-202ENST00000441560 PREX1Q8TCU6 1659 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 GOLGA6BA6NDN3 693 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 AGPSO00116 658 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
ATL1-202ENST00000441560 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 SPECC1LQ69YQ0 1117 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 DNAJC14Q6Y2X3 702 aaPredicted RBP11.16□□□□□ -0.62
ATL1-202ENST00000441560 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
ATL1-202ENST00000441560 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
ATL1-202ENST00000441560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.16□□□□□ -0.62
ATL1-202ENST00000441560 ECEL1O95672 775 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 PYGLP06737 847 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 PECAM1P16284 738 aaPredicted RBP11.16□□□□□ -0.62
ATL1-202ENST00000441560 SMTNP53814 917 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 STK38Q15208 465 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 ANKRD23Q86SG2 305 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 C3orf20Q8ND61 904 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
ATL1-202ENST00000441560 FAM163BP0C2L3 166 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 TBX2Q13207 712 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 PDCLQ13371 301 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 SNCBQ16143 134 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 CCDC13Q8IYE1 715 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 SSH3Q8TE77 659 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 SEC62Q99442 399 aaKnown RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 ZEB2O60315 1214 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 NMIQ13287 307 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 TUBB2AQ13885 445 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 KCNB1Q14721 858 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 NAA16Q6N069 864 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 NAPGQ99747 312 aaPredicted RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 TUBB2BQ9BVA1 445 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 SLC40A1Q9NP59 571 aa11.15□□□□□ -0.62
ATL1-202ENST00000441560 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.62
ATL1-202ENST00000441560 RASSF9O75901 435 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
ATL1-202ENST00000441560 Q6ZUG5 572 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms