RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ANO1Q5XXA6 986 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 KBTBD3Q8NAB2 608 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 EXOC4Q96A65 974 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 A0A087WZG4 1122 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 CMA1P23946 247 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
SHOX2-203ENST00000441443 RABGGTAQ92696 567 aa23.32■■□□□ 1.32
SHOX2-203ENST00000441443 SRLQ86TD4 932 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 FCHSD1Q86WN1 690 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 KIFC2Q96AC6 838 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 METTL22Q9BUU2 404 aaPredicted RBP23.31■■□□□ 1.32
SHOX2-203ENST00000441443 VPS18Q9P253 973 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 RRP15Q9Y3B9 282 aaKnown RBP23.31■■□□□ 1.32
SHOX2-203ENST00000441443 MST1RQ04912 1400 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 LAMA4Q16363 1823 aa23.31■■□□□ 1.32
SHOX2-203ENST00000441443 HSPD1P10809 573 aaKnown RBP23.31■■□□□ 1.32
SHOX2-203ENST00000441443 CCDC12Q8WUD4 166 aaPredicted RBP23.3■■□□□ 1.32
SHOX2-203ENST00000441443 PDE11AQ9HCR9 933 aa23.3■■□□□ 1.32
SHOX2-203ENST00000441443 TXLNAP40222 546 aa23.3■■□□□ 1.32
SHOX2-203ENST00000441443 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
SHOX2-203ENST00000441443 ATG3Q9NT62 314 aa23.3■■□□□ 1.32
SHOX2-203ENST00000441443 ACTN2P35609 894 aa23.29■■□□□ 1.32
SHOX2-203ENST00000441443 HAND2P61296 217 aa23.29■■□□□ 1.32
SHOX2-203ENST00000441443 NEUROD6Q96NK8 337 aa23.29■■□□□ 1.32
SHOX2-203ENST00000441443 PUF60Q9UHX1 559 aaKnown RBP23.29■■□□□ 1.32
SHOX2-203ENST00000441443 TUBE1Q9UJT0 475 aa23.29■■□□□ 1.32
SHOX2-203ENST00000441443 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
SHOX2-203ENST00000441443 RFX5P48382 616 aaPredicted RBP23.28■■□□□ 1.32
SHOX2-203ENST00000441443 DSCC1Q9BVC3 393 aa23.28■■□□□ 1.32
SHOX2-203ENST00000441443 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
SHOX2-203ENST00000441443 N4BP1O75113 896 aaKnown RBP23.27■■□□□ 1.32
SHOX2-203ENST00000441443 CDC27P30260 824 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 PDE4BQ07343 736 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 MTF1Q14872 753 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 FOXR1Q6PIV2 292 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 OLFM4Q6UX06 510 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 ZBTB3Q9H5J0 574 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 SUGCTQ9HAC7 445 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 CCDC151A5D8V7 595 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 WWC2Q6AWC2 1192 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 CLIC6Q96NY7 704 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 KLF18A0A0U1RQI7 1052 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 DHX16O60231 1041 aaKnown RBP23.27■■□□□ 1.32
SHOX2-203ENST00000441443 A1BGP04217 495 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 SHC4Q6S5L8 630 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 BRAPQ7Z569 592 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 TC2NQ8N9U0 490 aa23.27■■□□□ 1.32
SHOX2-203ENST00000441443 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 KIF23Q02241 960 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-203ENST00000441443 FOXP4Q8IVH2 680 aaPredicted RBP23.26■■□□□ 1.31
SHOX2-203ENST00000441443 AIFM3Q96NN9 605 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 MRPL44Q9H9J2 332 aaKnown RBP23.26■■□□□ 1.31
SHOX2-203ENST00000441443 LZTFL1Q9NQ48 299 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 PAG1Q9NWQ8 432 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 PSD3Q9NYI0 1048 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 MAP2K7O14733 419 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 CPLX1O14810 134 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 NOP2P46087 812 aaKnown RBP23.26■■□□□ 1.31
SHOX2-203ENST00000441443 LEKR1Q6ZMV7 388 aa23.26■■□□□ 1.31
SHOX2-203ENST00000441443 GOLGA6L9A6NEM1 432 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 CHMP4BP1P59074 171 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 SPATA31A3Q5VYP0 1347 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 A0A0U1RQJ8 604 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 ATRIPQ8WXE1 791 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 EFCC1Q9HA90 598 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 HELLSQ9NRZ9 838 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 MRC1P22897 1456 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 RFX7Q2KHR2 1363 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 TRPM3Q9HCF6 1732 aaPredicted RBP23.25■■□□□ 1.31
SHOX2-203ENST00000441443 FOXN1O15353 648 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 STX10O60499 249 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 LMBR1LQ6UX01 489 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 METTL16Q86W50 562 aaKnown RBP23.25■■□□□ 1.31
SHOX2-203ENST00000441443 PCDHA5Q9Y5H7 936 aa23.25■■□□□ 1.31
SHOX2-203ENST00000441443 BMP6P22004 513 aa23.24■■□□□ 1.31
SHOX2-203ENST00000441443 TIMM10P62072 90 aa23.24■■□□□ 1.31
SHOX2-203ENST00000441443 TBX2Q13207 712 aaPredicted RBP23.24■■□□□ 1.31
SHOX2-203ENST00000441443 LONRF3Q496Y0 759 aa23.24■■□□□ 1.31
SHOX2-203ENST00000441443 MAST3O60307 1309 aa23.24■■□□□ 1.31
SHOX2-203ENST00000441443 CCDC85AQ96PX6 553 aaPredicted RBP23.24■■□□□ 1.31
SHOX2-203ENST00000441443 ANKZF1Q9H8Y5 726 aa23.24■■□□□ 1.31
SHOX2-203ENST00000441443 TFRCP02786 760 aaKnown RBP23.23■■□□□ 1.31
SHOX2-203ENST00000441443 BRD3Q15059 726 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 ZMYM1Q5SVZ6 1142 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 PNKPQ96T60 521 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 HPS5Q9UPZ3 1129 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 BEND6Q5SZJ8 279 aaPredicted RBP23.23■■□□□ 1.31
SHOX2-203ENST00000441443 ZCRB1Q8TBF4 217 aaKnown RBP23.23■■□□□ 1.31
SHOX2-203ENST00000441443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.23■■□□□ 1.31
SHOX2-203ENST00000441443 FAN1Q9Y2M0 1017 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 OVOS2A0A0G2JMS6 1433 aa23.23■■□□□ 1.31
SHOX2-203ENST00000441443 PHACTR2O75167 634 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 IRX3P78415 501 aaPredicted RBP23.22■■□□□ 1.31
SHOX2-203ENST00000441443 JAKMIP3Q5VZ66 844 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 TRMT44Q8IYL2 757 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms