RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 TRIM37O94972 964 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 TFE3P19532 575 aaPredicted RBP8.03□□□□□ -1.12
PFDN4-202ENST00000441080 ZNF394Q53GI3 561 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 AGGF1Q8N302 714 aaeCLIP8.03□□□□□ -1.124e-8■□□□□ 9.4
PFDN4-202ENST00000441080 TMEM130Q8N3G9 435 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 ACSBG1Q96GR2 724 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 KRBA1A5PL33 1030 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 LIG1P18858 919 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
PFDN4-202ENST00000441080 KCNMA1Q12791 1236 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 EXOSC6Q5RKV6 272 aaKnown RBP8.02□□□□□ -1.13
PFDN4-202ENST00000441080 SCARA3Q6AZY7 606 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 GPBAR1Q8TDU6 330 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 RHOVQ96L33 236 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 MIR1-1HGQ9H1L0 117 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 AKTIPQ9H8T0 292 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 RAD18Q9NS91 495 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 PCDHB5Q9Y5E4 795 aa8.02□□□□□ -1.13
PFDN4-202ENST00000441080 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 ALX3O95076 343 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 PF4P02776 101 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 RASSF7Q02833 373 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 LMNB2Q03252 620 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 FAM160A1Q05DH4 1040 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 CAMK2GQ13555 558 aaPredicted RBP8.01□□□□□ -1.13
PFDN4-202ENST00000441080 SEPT6Q14141 434 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 ADGRE1Q14246 886 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 MBTPS1Q14703 1052 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 MPRIPQ6WCQ1 1025 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 GAL3ST3Q96A11 431 aa8.01□□□□□ -1.13
PFDN4-202ENST00000441080 DDX41Q9UJV9 622 aaKnown RBP8.01□□□□□ -1.13
PFDN4-202ENST00000441080 ZNF862O60290 1169 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 AOC2O75106 756 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 EIF4A3P38919 411 aaKnown RBP8□□□□□ -1.13
PFDN4-202ENST00000441080 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
PFDN4-202ENST00000441080 SNAP47Q5SQN1 464 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 FDX2Q6P4F2 183 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 ZNF654Q8IZM8 581 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 WFDC12Q8WWY7 111 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 WDR18Q9BV38 432 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 CYP4F12Q9HCS2 524 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 CACNA2D2Q9NY47 1150 aa8□□□□□ -1.13
PFDN4-202ENST00000441080 EPB41L3Q9Y2J2 1087 aaPredicted RBP8□□□□□ -1.13
PFDN4-202ENST00000441080 GLB1P16278 677 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 NOS3P29474 1203 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 CHRNA4P43681 627 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 RACK1P63244 317 aaKnown RBP7.99□□□□□ -1.13
PFDN4-202ENST00000441080 RAD51AP2Q09MP3 1159 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 KIF4BQ2VIQ3 1234 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 AKAP4Q5JQC9 854 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 DIEXFQ68CQ4 756 aaKnown RBP7.99□□□□□ -1.13
PFDN4-202ENST00000441080 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
PFDN4-202ENST00000441080 TGIF2Q9GZN2 237 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 CCSER2Q9H7U1 834 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 SUGCTQ9HAC7 445 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 PCDHA4Q9UN74 947 aa7.99□□□□□ -1.13
PFDN4-202ENST00000441080 C1QTNF9BB2RNN3 333 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 GSK3AP49840 483 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 PTPN11Q06124 597 aaPredicted RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 ANKRD34AQ69YU3 496 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 BNC2Q6ZN30 1099 aaPredicted RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 CD163Q86VB7 1156 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 TXNRD3Q86VQ6 643 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 C12orf50Q8NA57 414 aaPredicted RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 GOLM1Q8NBJ4 401 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 JARID2Q92833 1246 aaPredicted RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 SPON2Q9BUD6 331 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 CEP41Q9BYV8 373 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 ADAMTS1Q9UHI8 967 aa7.98□□□□□ -1.13
PFDN4-202ENST00000441080 SUPT16HQ9Y5B9 1047 aaKnown RBP7.98□□□□□ -1.13
PFDN4-202ENST00000441080 GDF11O95390 407 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 ADH5P11766 374 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 GARTP22102 1010 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 FBXL19Q6PCT2 694 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 Q6ZS46 218 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 KIAA0825Q8IV33 1275 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 ZNF296Q8WUU4 475 aaPredicted RBP7.97□□□□□ -1.13
PFDN4-202ENST00000441080 AP4E1Q9UPM8 1137 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 SYNGAP1Q96PV0 1343 aa7.97□□□□□ -1.13
PFDN4-202ENST00000441080 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
PFDN4-202ENST00000441080 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.14
PFDN4-202ENST00000441080 ID3Q02535 119 aa7.96□□□□□ -1.14
PFDN4-202ENST00000441080 SOX4Q06945 474 aaPredicted RBP7.96□□□□□ -1.14
PFDN4-202ENST00000441080 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.96□□□□□ -1.14
PFDN4-202ENST00000441080 TMEM151AQ8N4L1 468 aa7.96□□□□□ -1.14
PFDN4-202ENST00000441080 ACBD3Q9H3P7 528 aa7.96□□□□□ -1.14
PFDN4-202ENST00000441080 KCNQ5Q9NR82 932 aa7.96□□□□□ -1.14
PFDN4-202ENST00000441080 PCDHGC5Q9Y5F6 944 aa7.96□□□□□ -1.14
PFDN4-202ENST00000441080 TMPRSS2O15393 492 aa7.95□□□□□ -1.14
PFDN4-202ENST00000441080 TIAF1O95411 115 aa7.95□□□□□ -1.14
PFDN4-202ENST00000441080 BPNT1O95861 308 aa7.95□□□□□ -1.14
PFDN4-202ENST00000441080 F13A1P00488 732 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms