RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 UBE2HP62256 183 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 LCORLQ8N3X6 602 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 LLPHQ9BRT6 129 aaKnown RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 TFIP11Q9UBB9 837 aaKnown RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 B4E1Z4 1266 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 CPLX1O14810 134 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 NFIXQ14938 502 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
LIMD1-202ENST00000440097 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
LIMD1-202ENST00000440097 RRP12Q5JTH9 1297 aaKnown RBP16.53■□□□□ 0.24
LIMD1-202ENST00000440097 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 KLRK1P26718 216 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 CTDSPL2Q05D32 466 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
LIMD1-202ENST00000440097 NBPF3Q9H094 633 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
LIMD1-202ENST00000440097 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
LIMD1-202ENST00000440097 ANTXR2P58335 489 aa16.52■□□□□ 0.24
LIMD1-202ENST00000440097 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
LIMD1-202ENST00000440097 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
LIMD1-202ENST00000440097 FAM84BQ96KN1 310 aaPredicted RBP16.52■□□□□ 0.24
LIMD1-202ENST00000440097 CARMIL3Q8ND23 1372 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 CTDNEP1O95476 244 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 PLCB2Q00722 1185 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 ANKRD2Q9GZV1 360 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.23
LIMD1-202ENST00000440097 JAG2Q9Y219 1238 aa16.52■□□□□ 0.23
LIMD1-202ENST00000440097 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
LIMD1-202ENST00000440097 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
LIMD1-202ENST00000440097 KDM4AO75164 1064 aa16.51■□□□□ 0.23
LIMD1-202ENST00000440097 GNAT2P19087 354 aa16.51■□□□□ 0.23
LIMD1-202ENST00000440097 SMARCC2Q8TAQ2 1214 aa16.51■□□□□ 0.23
LIMD1-202ENST00000440097 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
LIMD1-202ENST00000440097 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 GSG1L2A8MUP6 293 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
LIMD1-202ENST00000440097 CEBPZQ03701 1054 aaKnown RBP16.5■□□□□ 0.23
LIMD1-202ENST00000440097 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
LIMD1-202ENST00000440097 NEDD4P46934 1319 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 MAGEB6P1A0A0J9YX57 407 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 RXRAP19793 462 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 CYB5R4Q7L1T6 521 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
LIMD1-202ENST00000440097 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
LIMD1-202ENST00000440097 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 ADGRA1Q86SQ6 560 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
LIMD1-202ENST00000440097 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
LIMD1-202ENST00000440097 LETM1O95202 739 aaPredicted RBP16.49■□□□□ 0.23
LIMD1-202ENST00000440097 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 MICU3Q86XE3 530 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 SCAND2PQ9GZW5 306 aaPredicted RBP16.49■□□□□ 0.23
LIMD1-202ENST00000440097 KCNF1Q9H3M0 494 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 AP5Z1O43299 807 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
LIMD1-202ENST00000440097 ADRA2BP18089 450 aa16.48■□□□□ 0.23
LIMD1-202ENST00000440097 ZSCAN16Q9H4T2 348 aaPredicted RBP16.48■□□□□ 0.23
LIMD1-202ENST00000440097 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
LIMD1-202ENST00000440097 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
LIMD1-202ENST00000440097 ALX1Q15699 326 aa16.48■□□□□ 0.23
LIMD1-202ENST00000440097 TAF1LQ8IZX4 1826 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 METAP2P50579 478 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIMD1-202ENST00000440097 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 GIMAP6Q6P9H5 292 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 ORC3Q9UBD5 711 aaPredicted RBP16.47■□□□□ 0.23
LIMD1-202ENST00000440097 PNPLA7Q6ZV29 1317 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 LY75O60449 1722 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIMD1-202ENST00000440097 TM4SF1P30408 202 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 ST5P78524 1137 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
LIMD1-202ENST00000440097 KIF20AO95235 890 aa16.46■□□□□ 0.23
LIMD1-202ENST00000440097 EVCP57679 992 aa16.46■□□□□ 0.23
LIMD1-202ENST00000440097 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
LIMD1-202ENST00000440097 RESTQ13127 1097 aa16.46■□□□□ 0.23
LIMD1-202ENST00000440097 FBXO33Q7Z6M2 555 aa16.46■□□□□ 0.23
LIMD1-202ENST00000440097 TXNRD3Q86VQ6 643 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms