RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MMP14P50281 582 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HTRA3P83110 453 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MECOMQ03112 1051 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 APOBEC3HQ6NTF7 200 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 VEZTQ9HBM0 779 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DIAPH3Q9NSV4 1193 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 RAI14Q9P0K7 980 aa17.5■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HIP1O00291 1037 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 CACNB3P54284 484 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 PRAMEF18Q5VWM3 479 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 SPTY2D1Q68D10 685 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ZDHHC15Q96MV8 337 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 USP26Q9BXU7 913 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 LRP2BPQ9P2M1 347 aa17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ZNF70Q9UC06 446 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-204ENST00000440083 GOLIM4O00461 696 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HSPA6P17066 643 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ATP5JP18859 108 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HHIPL2Q6UWX4 724 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 CDC37L1Q7L3B6 337 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 DOCK2Q92608 1830 aa17.48■□□□□ 0.39
TNFRSF1A-204ENST00000440083 PITPNM2Q9BZ72 1349 aa17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 RABEP1Q15276 862 aa17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 NSUN4Q96CB9 384 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 CDCA5Q96FF9 252 aa17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MROH7-TTC4A0A0A0MT08 1334 aa17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 GAKO14976 1311 aa17.47■□□□□ 0.39
TNFRSF1A-204ENST00000440083 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 IDH1O75874 414 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 APLP1P51693 650 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 ADGRA1Q86SQ6 560 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 HAUS7Q99871 368 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 MRIQ9BWK5 157 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
TNFRSF1A-204ENST00000440083 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MYO1BO43795 1136 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CELF2O95319 508 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 BTDP43251 543 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CST9Q5W186 159 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CDC42EP5Q6NZY7 148 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CDAN1Q8IWY9 1227 aa17.45■□□□□ 0.38
TNFRSF1A-204ENST00000440083 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CHGBP05060 677 aa17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 NAA16Q6N069 864 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SNX21Q969T3 373 aa17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 DEFB129Q9H1M3 183 aa17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SGSM2O43147 1006 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 GSTO1P78417 241 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 NFIAQ12857 509 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SLFNL1Q499Z3 407 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 USP40Q9NVE5 1235 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 RAD50Q92878 1312 aa17.43■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CYP7A1P22680 504 aa17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 RASA3Q14644 834 aa17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CWC27Q6UX04 472 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SLF2Q8IX21 1173 aa17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
TNFRSF1A-204ENST00000440083 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 PDE6AP16499 860 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 RHBDL3P58872 404 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 KIF2CQ99661 725 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 ANP32EQ9BTT0 268 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 TMOD2Q9NZR1 351 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MYH7P12883 1935 aa17.41■□□□□ 0.38
TNFRSF1A-204ENST00000440083 ST18O60284 1047 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 LDHCP07864 332 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 DYNLL1P63167 89 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 TCP10Q12799 353 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MAP3K12Q12852 859 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MOB2Q70IA6 237 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 ZFPM1Q8IX07 1006 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 MIGA1Q8NAN2 632 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 CREBZFQ9NS37 354 aa17.4■□□□□ 0.38
TNFRSF1A-204ENST00000440083 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms