RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 LLPHQ9BRT6 129 aaKnown RBP17.58■□□□□ 0.41
IFT140-204ENST00000439987 LMBRD1Q9NUN5 540 aa17.58■□□□□ 0.41
IFT140-204ENST00000439987 POLLQ9UGP5 575 aa17.58■□□□□ 0.41
IFT140-204ENST00000439987 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.41
IFT140-204ENST00000439987 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 IGSF3O75054 1194 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 DYNLL1P63167 89 aaKnown RBP17.58■□□□□ 0.4
IFT140-204ENST00000439987 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 ATP6V0A2Q9Y487 856 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 NEDD4P46934 1319 aa17.58■□□□□ 0.4
IFT140-204ENST00000439987 F13A1P00488 732 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 AKNAD1Q5T1N1 836 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 CD209Q9NNX6 404 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 CHD4Q14839 1912 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 B4E1Z4 1266 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 JAK2O60674 1132 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 STK32BQ9NY57 414 aa17.57■□□□□ 0.4
IFT140-204ENST00000439987 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
IFT140-204ENST00000439987 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
IFT140-204ENST00000439987 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
IFT140-204ENST00000439987 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
IFT140-204ENST00000439987 XRCC6P12956 609 aaKnown RBP eCLIP17.56■□□□□ 0.4
IFT140-204ENST00000439987 IL1R1P14778 569 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 CCT2P78371 535 aaKnown RBP17.56■□□□□ 0.4
IFT140-204ENST00000439987 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 SMARCC2Q8TAQ2 1214 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 CHMP4CQ96CF2 233 aa17.56■□□□□ 0.4
IFT140-204ENST00000439987 PRPF40AO75400 957 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 LDHBP07195 334 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 INCENPQ9NQS7 918 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 TACC3Q9Y6A5 838 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 C6orf229H3BNL8 230 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 PPARAQ07869 468 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 PKNOX2Q96KN3 472 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 KRT23Q9C075 422 aa17.55■□□□□ 0.4
IFT140-204ENST00000439987 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 AATFQ9NY61 560 aaKnown RBP eCLIP17.55■□□□□ 0.4
IFT140-204ENST00000439987 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
IFT140-204ENST00000439987 KLF18A0A0U1RQI7 1052 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 CTDNEP1O95476 244 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 GIMAP6Q6P9H5 292 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
IFT140-204ENST00000439987 KIAA1551Q9HCM1 1747 aa17.54■□□□□ 0.4
IFT140-204ENST00000439987 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
IFT140-204ENST00000439987 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
IFT140-204ENST00000439987 KDM4AO75164 1064 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
IFT140-204ENST00000439987 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
IFT140-204ENST00000439987 ZSWIM5Q9P217 1185 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 CDC37L1Q7L3B6 337 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 DDX11Q96FC9 970 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 NAP1L5Q96NT1 182 aaPredicted RBP17.53■□□□□ 0.4
IFT140-204ENST00000439987 HPS5Q9UPZ3 1129 aa17.53■□□□□ 0.4
IFT140-204ENST00000439987 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.4
IFT140-204ENST00000439987 MINDY4BA8MYZ0 360 aa17.52■□□□□ 0.4
IFT140-204ENST00000439987 MRE11P49959 708 aa17.52■□□□□ 0.4
IFT140-204ENST00000439987 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.4
IFT140-204ENST00000439987 BAZ2AQ9UIF9 1905 aaKnown RBP17.52■□□□□ 0.4
IFT140-204ENST00000439987 GSTO1P78417 241 aa17.52■□□□□ 0.39
IFT140-204ENST00000439987 MPNDQ8N594 471 aa17.52■□□□□ 0.39
IFT140-204ENST00000439987 FAM184AQ8NB25 1140 aa17.52■□□□□ 0.39
IFT140-204ENST00000439987 TCHHQ07283 1943 aa17.52■□□□□ 0.39
IFT140-204ENST00000439987 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
IFT140-204ENST00000439987 GRIK5Q16478 980 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 DHX16O60231 1041 aaKnown RBP17.51■□□□□ 0.39
IFT140-204ENST00000439987 BAG6P46379 1132 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 HSP90AA2PQ14568 343 aaPredicted RBP17.51■□□□□ 0.39
IFT140-204ENST00000439987 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
IFT140-204ENST00000439987 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 DCP1AQ9NPI6 582 aaPredicted RBP17.51■□□□□ 0.39
IFT140-204ENST00000439987 KIF3AQ9Y496 699 aa17.51■□□□□ 0.39
IFT140-204ENST00000439987 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 CTR9Q6PD62 1173 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
IFT140-204ENST00000439987 ZNF622Q969S3 477 aaKnown RBP eCLIP17.5■□□□□ 0.39
IFT140-204ENST00000439987 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms