RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PIH1D3	Q9NQM4	214 aa	Known RBP	11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	USP40	Q9NVE5	1235 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PAG1	Q9NWQ8	432 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PCDHAC2	Q9Y5I4	1007 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MROH7-TTC4	A0A0A0MT08	1334 aa		11.56	□□□□□ -0.56
SMARCA2-213	ENST00000439732	FKBP1B	P68106	108 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	RASA3	Q14644	834 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CST9	Q5W186	159 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	B4GALNT3	Q6L9W6	998 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ZSCAN25	Q6NSZ9	544 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CDC42EP5	Q6NZY7	148 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CHD1L	Q86WJ1	897 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	STAP2	Q9UGK3	403 aa		11.55	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TCP10L2	B9ZVM9	353 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PPP1R12B	O60237	982 aa	Predicted RBP	11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	CYP7A1	P22680	504 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	BTD	P43251	543 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PPP4C	P60510	307 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	SLC9C2	Q5TAH2	1124 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ERICH6B	Q5W0A0	696 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	LNPK	Q9C0E8	428 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ANTXR1	Q9H6X2	564 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ZNF408	Q9H9D4	720 aa		11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	GBA2	Q9HCG7	927 aa	Predicted RBP	11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ABT1	Q9ULW3	272 aa	Known RBP	11.54	□□□□□ -0.56
SMARCA2-213	ENST00000439732	AK9	Q5TCS8	1911 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NPM3	O75607	178 aa	Known RBP	11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	PDE1A	P54750	535 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	FMR1	Q06787	632 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ARMC9	Q7Z3E5	817 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	TICAM2	Q86XR7	235 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MAGEB6	Q8N7X4	407 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	ZNF384	Q8TF68	577 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	FAM151A	Q8WW52	585 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	IDI2	Q9BXS1	227 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	NDUFB9	Q9Y6M9	179 aa		11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.53	□□□□□ -0.56
SMARCA2-213	ENST00000439732	UNCX	A6NJT0	531 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ENTPD3	O75355	529 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PDE6A	P16499	860 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TTLL12	Q14166	644 aa	Predicted RBP	11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DEFB115	Q30KQ5	88 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PRAMEF18	Q5VWM3	479 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TEX11	Q8IYF3	940 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	HHIPL1	Q96JK4	782 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	SCAF8	Q9UPN6	1271 aa	Known RBP	11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	AOX1	Q06278	1338 aa		11.52	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ZFY	P08048	801 aa	Predicted RBP	11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CACNB3	P54284	484 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	HUNK	P57058	714 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	RHBDL3	P58872	404 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	UBE3C	Q15386	1083 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DLK2	Q6UY11	383 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	SAPCD2	Q86UD0	394 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	KBTBD3	Q8NAB2	608 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PI4K2B	Q8TCG2	481 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TMEM39B	Q9GZU3	492 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	OSBPL3	Q9H4L5	887 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TLL2	Q9Y6L7	1015 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	SALL3	Q9BXA9	1300 aa		11.51	□□□□□ -0.57
SMARCA2-213	ENST00000439732	MAGEB6P1	A0A0J9YX57	407 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	RASSF10	A6NK89	507 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	WDHD1	O75717	1129 aa	Predicted RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ADD2	P35612	726 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ECE1	P42892	770 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	IREB2	P48200	963 aa	Known RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	RGS3	P49796	1198 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TCP10	Q12799	353 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TSHZ3	Q63HK5	1081 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DCAF15	Q66K64	600 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PLEKHM2	Q8IWE5	1019 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	EDC3	Q96F86	508 aa	Known RBP	11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CCDC136	Q96JN2	1154 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TEPSIN	Q96N21	525 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	FAM198A	Q9UFP1	575 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ZNF532	Q9HCE3	1301 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CNTNAP1	P78357	1384 aa		11.5	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DOCK2	Q92608	1830 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	RNF113A	O15541	343 aa	Known RBP	11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	NFIA	Q12857	509 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	ADGRA1	Q86SQ6	560 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DNAJC5G	Q8N7S2	189 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CCDC102A	Q96A19	550 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	EVI5L	Q96CN4	794 aa		11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	DHX36	Q9H2U1	1008 aa	Known RBP	11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.49	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PCNT	O95613	3336 aa		11.48	□□□□□ -0.57
SMARCA2-213	ENST00000439732	TCRBV5S4A2T	A0A5A2	114 aa		11.48	□□□□□ -0.57
SMARCA2-213	ENST00000439732	UBE2Q2L	H0YL09	131 aa		11.48	□□□□□ -0.57
SMARCA2-213	ENST00000439732	HTRA3	P83110	453 aa		11.48	□□□□□ -0.57
SMARCA2-213	ENST00000439732	PICALM	Q13492	652 aa		11.48	□□□□□ -0.57

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