RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-202ENST00000439724 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
SMAD3-202ENST00000439724 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
SMAD3-202ENST00000439724 DUOX1Q9NRD9 1551 aa13.83□□□□□ -0.19
SMAD3-202ENST00000439724 LRRC37AA6NMS7 1700 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 B4E1Z4 1266 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 H3BQV1 296 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 PLSCR1O15162 318 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 MTA3Q9BTC8 594 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
SMAD3-202ENST00000439724 DDR1Q08345 913 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 ZNF384Q8TF68 577 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
SMAD3-202ENST00000439724 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-202ENST00000439724 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-202ENST00000439724 ANAPC4Q9UJX5 808 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 RGPD3A6NKT7 1758 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-202ENST00000439724 RGPD4Q7Z3J3 1758 aa13.82□□□□□ -0.2
SMAD3-202ENST00000439724 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
SMAD3-202ENST00000439724 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-202ENST00000439724 LIFRP42702 1097 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 CTDSPL2Q05D32 466 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 LRSAM1Q6UWE0 723 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 MFSD6Q6ZSS7 791 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 TXNRD3Q86VQ6 643 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 IGDCC4Q8TDY8 1250 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 RBM17Q96I25 401 aaKnown RBP13.81□□□□□ -0.2
SMAD3-202ENST00000439724 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 TACC3Q9Y6A5 838 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 ANKRD31Q8N7Z5 1873 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 NID2Q14112 1375 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 LAMB1P07942 1786 aa13.81□□□□□ -0.2
SMAD3-202ENST00000439724 KLRG2A4D1S0 409 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-202ENST00000439724 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
SMAD3-202ENST00000439724 MECOMQ03112 1051 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 PPARAQ07869 468 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-202ENST00000439724 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
SMAD3-202ENST00000439724 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 LTBP1Q14766 1721 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 SYCE3A1L190 88 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 KDM4AO75164 1064 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 CCDC183Q5T5S1 534 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 WDR66Q8TBY9 1149 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 PANK2Q9BZ23 570 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
SMAD3-202ENST00000439724 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
SMAD3-202ENST00000439724 TNS1Q9HBL0 1735 aaKnown RBP13.79□□□□□ -0.2
SMAD3-202ENST00000439724 CPLX1O14810 134 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 BBOX1O75936 387 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 PCP11498 1178 aaKnown RBP13.79□□□□□ -0.2
SMAD3-202ENST00000439724 ATP2B4P23634 1241 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
SMAD3-202ENST00000439724 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-202ENST00000439724 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 TMC4Q7Z404 712 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
SMAD3-202ENST00000439724 ECM29Q5VYK3 1845 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 CDKL5O76039 1030 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 PRDX5P30044 214 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 RCAN1P53805 252 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 GPSM2P81274 684 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 SART3Q15020 963 aaKnown RBP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 SPATA32Q96LK8 384 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 INCENPQ9NQS7 918 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
SMAD3-202ENST00000439724 ORC3Q9UBD5 711 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-202ENST00000439724 DLEC1Q9Y238 1755 aa13.77□□□□□ -0.2
SMAD3-202ENST00000439724 ZBTB43O43298 467 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 FGRP09769 529 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 CPLX2Q6PUV4 134 aaKnown RBP13.77□□□□□ -0.21
SMAD3-202ENST00000439724 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.21
SMAD3-202ENST00000439724 SENP2Q9HC62 589 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
SMAD3-202ENST00000439724 CCDC69A6NI79 296 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms