RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CPLX2Q6PUV4 134 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 SLC26A6Q9BXS9 759 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 NAPBQ9H115 298 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 EEF2KMTQ96G04 330 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 DRC1Q96MC2 740 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 ARMT1Q9H993 441 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 NCOA7Q8NI08 942 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 FAM170AA1A519 330 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 EXOC5O00471 708 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 PRDM1O75626 825 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 METAP2P50579 478 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZSCAN26Q16670 478 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 TMEM67Q5HYA8 995 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 CLIC6Q96NY7 704 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
CDC42SE1-202ENST00000439374 PNOCQ13519 176 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 SART3Q15020 963 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZMYM1Q5SVZ6 1142 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 TAF3Q5VWG9 929 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 HEG1Q9ULI3 1381 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZMYND10O75800 440 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 DNA2P51530 1060 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 SF3A3Q12874 501 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 RESTQ13127 1097 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 GPS2Q13227 327 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 SMC1AQ14683 1233 aaKnown RBP11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 IQCB1Q15051 598 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 STAMQ92783 540 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 HELLSQ9NRZ9 838 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 PCDHA7Q9UN72 937 aa11.42□□□□□ -0.58
CDC42SE1-202ENST00000439374 PRKAB2O43741 272 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 TTC19Q6DKK2 380 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 SPATA31A3Q5VYP0 1347 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 MBD4O95243 580 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 FANCCQ00597 558 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 KCTD19Q17RG1 926 aaPredicted RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 EPB41L2O43491 1005 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 PFKFB2O60825 505 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 CTDNEP1O95476 244 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 CASQ1P31415 396 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 MTF1Q14872 753 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 MRPS27Q92552 414 aaKnown RBP11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 WDR24Q96S15 920 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
CDC42SE1-202ENST00000439374 A0A0U1RQJ8 604 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 N4BP1O75113 896 aaKnown RBP11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 ATRIPQ8WXE1 791 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 MED23Q9ULK4 1368 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 MCAMP43121 646 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 BCAMP50895 628 aa11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
CDC42SE1-202ENST00000439374 WDR17Q8IZU2 1322 aa11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 SPTLC2O15270 562 aa11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 PDE11AQ9HCR9 933 aa11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 PIH1D3Q9NQM4 214 aaKnown RBP11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 FHOD1Q9Y613 1164 aa11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 SLC12A7Q9Y666 1083 aa11.4□□□□□ -0.59
CDC42SE1-202ENST00000439374 SLIT1O75093 1534 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 ERICH2A1L162 156 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 FOXN1O15353 648 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 APPBP2Q92624 585 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 ARFGAP3Q9NP61 516 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 UTYO14607 1347 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 CASP1P29466 404 aa11.39□□□□□ -0.59
CDC42SE1-202ENST00000439374 CCDC102BQ68D86 513 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms