RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 RXRAP19793 462 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 C11orf57Q6ZUT1 292 aaPredicted RBP18.03■□□□□ 0.48
DHFR-201ENST00000439211 CCDC82Q8N4S0 544 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 CNNM1Q9NRU3 951 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
DHFR-201ENST00000439211 SASH3O75995 380 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 ZRANB2O95218 330 aaKnown RBP eCLIP18.03■□□□□ 0.48
DHFR-201ENST00000439211 INPP5BP32019 993 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
DHFR-201ENST00000439211 E7EWF7 191 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 ZNF213O14771 459 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 PHKG2P15735 406 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 RESTQ13127 1097 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 HSP90AA4PQ58FG1 418 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 HAUS7Q99871 368 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.48
DHFR-201ENST00000439211 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
DHFR-201ENST00000439211 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
DHFR-201ENST00000439211 RHOXF2BP0C7M4 288 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 GPTP24298 496 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 FAM160A1Q05DH4 1040 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 TTLL7Q6ZT98 887 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 RNF217Q8TC41 542 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.47
DHFR-201ENST00000439211 RHOXF2Q9BQY4 288 aa18.02■□□□□ 0.47
DHFR-201ENST00000439211 NRXN3Q9Y4C0 1643 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 RNF113AO15541 343 aaKnown RBP18.01■□□□□ 0.47
DHFR-201ENST00000439211 LMOD1P29536 600 aaPredicted RBP18.01■□□□□ 0.47
DHFR-201ENST00000439211 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 CDC25BP30305 580 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 CCZ1BP86790 482 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 CCZ1P86791 482 aaPredicted RBP18.01■□□□□ 0.47
DHFR-201ENST00000439211 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 FBXW10Q5XX13 1052 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 CEP120Q8N960 986 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 NSUN7Q8NE18 718 aaKnown RBP18.01■□□□□ 0.47
DHFR-201ENST00000439211 VEZTQ9HBM0 779 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 PRC1O43663 620 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
DHFR-201ENST00000439211 SCP2P22307 547 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 MICU3Q86XE3 530 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 L2HGDHQ9H9P8 463 aa18.01■□□□□ 0.47
DHFR-201ENST00000439211 FRMD3A2A2Y4 597 aa18■□□□□ 0.47
DHFR-201ENST00000439211 PSD3Q9NYI0 1048 aa18■□□□□ 0.47
DHFR-201ENST00000439211 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
DHFR-201ENST00000439211 FAM43BQ6ZT52 329 aaPredicted RBP18■□□□□ 0.47
DHFR-201ENST00000439211 REXO1L1PQ8IX06 675 aa18■□□□□ 0.47
DHFR-201ENST00000439211 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
DHFR-201ENST00000439211 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
DHFR-201ENST00000439211 N4BP2L2Q92802 583 aaPredicted RBP18■□□□□ 0.47
DHFR-201ENST00000439211 GBP3Q9H0R5 595 aa18■□□□□ 0.47
DHFR-201ENST00000439211 PFKFB2O60825 505 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 TADA3O75528 432 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 CCT5P48643 541 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 PDIA6Q15084 440 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 CAPN7Q9Y6W3 813 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 PSDA5PKW4 1024 aaPredicted RBP17.99■□□□□ 0.47
DHFR-201ENST00000439211 E4F1Q66K89 784 aaPredicted RBP17.99■□□□□ 0.47
DHFR-201ENST00000439211 SUGP1Q8IWZ8 645 aaKnown RBP17.99■□□□□ 0.47
DHFR-201ENST00000439211 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
DHFR-201ENST00000439211 PUS3Q9BZE2 481 aaKnown RBP17.99■□□□□ 0.47
DHFR-201ENST00000439211 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 ERBB3P21860 1342 aa17.99■□□□□ 0.47
DHFR-201ENST00000439211 PPP1R12AO14974 1030 aaPredicted RBP17.98■□□□□ 0.47
DHFR-201ENST00000439211 SPTLC2O15270 562 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
DHFR-201ENST00000439211 OLFM4Q6UX06 510 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 AFAP1L1Q8TED9 768 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 HELLSQ9NRZ9 838 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 H3BQF6 201 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 EYA2O00167 538 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 PPFIA4O75335 1185 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 NAA25Q14CX7 972 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 KIF4BQ2VIQ3 1234 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 RNF187Q5TA31 235 aaPredicted RBP17.98■□□□□ 0.47
DHFR-201ENST00000439211 WWC2Q6AWC2 1192 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
DHFR-201ENST00000439211 A0A0G2JLW4 131 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 FAM89AQ96GI7 184 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.47
DHFR-201ENST00000439211 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
DHFR-201ENST00000439211 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 AKAP17AQ02040 695 aaKnown RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 KARSQ15046 597 aaKnown RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 TTC19Q6DKK2 380 aaPredicted RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 C19orf44Q9H6X5 657 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 PDIA3P30101 505 aaKnown RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 CLNS1AP54105 237 aaKnown RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
DHFR-201ENST00000439211 NEDD9Q14511 834 aa17.97■□□□□ 0.47
DHFR-201ENST00000439211 LDHAL6AQ6ZMR3 332 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms