RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 WRNIP1Q96S55 665 aa22.84■■□□□ 1.25
AC004540.1-201ENST00000439120 HPS5Q9UPZ3 1129 aa22.84■■□□□ 1.25
AC004540.1-201ENST00000439120 TNNQ9UQP3 1299 aa22.84■■□□□ 1.25
AC004540.1-201ENST00000439120 RPAP1Q9BWH6 1393 aaPredicted RBP22.84■■□□□ 1.25
AC004540.1-201ENST00000439120 A0A1B0GUL7 405 aa22.83■■□□□ 1.25
AC004540.1-201ENST00000439120 MVPQ14764 893 aaKnown RBP22.83■■□□□ 1.25
AC004540.1-201ENST00000439120 AK9Q5TCS8 1911 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 GTF2A2P52657 109 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 SOX10P56693 466 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 TCP10Q12799 353 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 GORABQ5T7V8 394 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 CDC42EP5Q6NZY7 148 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 DZIP1Q86YF9 867 aaKnown RBP22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 CNKSR2Q8WXI2 1034 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 NEUROD6Q96NK8 337 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 ABCF2Q9UG63 623 aa22.82■■□□□ 1.24
AC004540.1-201ENST00000439120 CCL15-CCL14A0A0B4J2E2 113 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 TESPA1A2RU30 521 aaPredicted RBP22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 G3BP1Q13283 466 aaKnown RBP eCLIP22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 CRHR2Q13324 411 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 CCL15Q16663 113 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 FBXO46Q6PJ61 603 aaPredicted RBP22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 FTSJ3Q8IY81 847 aaKnown RBP22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 XAGE2Q96GT9 111 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 ZNF341Q9BYN7 854 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 USP40Q9NVE5 1235 aa22.81■■□□□ 1.24
AC004540.1-201ENST00000439120 RASGRF1Q13972 1273 aa22.8■■□□□ 1.24
AC004540.1-201ENST00000439120 SPTY2D1Q68D10 685 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-201ENST00000439120 SLF2Q8IX21 1173 aa22.8■■□□□ 1.24
AC004540.1-201ENST00000439120 TMEM57Q8N5G2 664 aa22.8■■□□□ 1.24
AC004540.1-201ENST00000439120 ZKSCAN4Q969J2 545 aaPredicted RBP22.8■■□□□ 1.24
AC004540.1-201ENST00000439120 MYH2Q9UKX2 1941 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 SPDYE5A6NIY4 337 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 WDHD1O75717 1129 aaPredicted RBP22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 MIGA2Q7L4E1 593 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 ERO1BQ86YB8 467 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 ERO1AQ96HE7 468 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 MS4A4AQ96JQ5 239 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 PTPN18Q99952 460 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 TRIM17Q9Y577 477 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 SNCAIPQ9Y6H5 919 aa22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 PDS5AQ29RF7 1337 aaKnown RBP22.79■■□□□ 1.24
AC004540.1-201ENST00000439120 ZBTB22O15209 634 aa22.78■■□□□ 1.24
AC004540.1-201ENST00000439120 BRI3BPQ8WY22 251 aa22.78■■□□□ 1.24
AC004540.1-201ENST00000439120 PNMA6EA0A0J9YXQ4 647 aa22.77■■□□□ 1.24
AC004540.1-201ENST00000439120 NFIAQ12857 509 aa22.77■■□□□ 1.24
AC004540.1-201ENST00000439120 TAF1CQ15572 869 aaPredicted RBP22.77■■□□□ 1.24
AC004540.1-201ENST00000439120 CETPP11597 493 aa22.76■■□□□ 1.23
AC004540.1-201ENST00000439120 SP3Q02447 781 aa22.76■■□□□ 1.23
AC004540.1-201ENST00000439120 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
AC004540.1-201ENST00000439120 SNAPC2Q13487 334 aa22.76■■□□□ 1.23
AC004540.1-201ENST00000439120 ZFYVE28Q9HCC9 887 aa22.76■■□□□ 1.23
AC004540.1-201ENST00000439120 PPIL2Q13356 520 aa22.75■■□□□ 1.23
AC004540.1-201ENST00000439120 ERICH6Q7L0X2 663 aa22.75■■□□□ 1.23
AC004540.1-201ENST00000439120 ITPRIPQ8IWB1 547 aa22.75■■□□□ 1.23
AC004540.1-201ENST00000439120 CD99L2Q8TCZ2 262 aa22.75■■□□□ 1.23
AC004540.1-201ENST00000439120 FAM198AQ9UFP1 575 aa22.75■■□□□ 1.23
AC004540.1-201ENST00000439120 INPP5BP32019 993 aa22.74■■□□□ 1.23
AC004540.1-201ENST00000439120 OTOP1Q7RTM1 612 aa22.74■■□□□ 1.23
AC004540.1-201ENST00000439120 ZSCAN29Q8IWY8 852 aaPredicted RBP22.74■■□□□ 1.23
AC004540.1-201ENST00000439120 GAKO14976 1311 aa22.74■■□□□ 1.23
AC004540.1-201ENST00000439120 IRF6O14896 467 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 RGS3P49796 1198 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 PPATQ06203 517 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 FAM43AQ8N2R8 423 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 SPATA5Q8NB90 893 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 EFCC1Q9HA90 598 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 DOCK2Q92608 1830 aa22.73■■□□□ 1.23
AC004540.1-201ENST00000439120 ENTPD3O75355 529 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 BTDP43251 543 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 MECOMQ03112 1051 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 ARHGEF6Q15052 776 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 IDI2Q9BXS1 227 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 HMG20BQ9P0W2 317 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 MROH7-TTC4A0A0A0MT08 1334 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 ZBED9Q6R2W3 1325 aa22.72■■□□□ 1.23
AC004540.1-201ENST00000439120 UQCRFS1P1P0C7P4 283 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 GSTO1P78417 241 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 PICALMQ13492 652 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 FAM163AQ96GL9 167 aaPredicted RBP22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 C1orf115Q9H7X2 142 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 RAI14Q9P0K7 980 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 ZNF112Q9UJU3 913 aa22.71■■□□□ 1.23
AC004540.1-201ENST00000439120 LDHCP07864 332 aa22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 ARID4AP29374 1257 aaPredicted RBP22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 ATP8B2P98198 1209 aa22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 ZFPM1Q8IX07 1006 aa22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 ZCCHC17Q9NP64 241 aaKnown RBP22.7■■□□□ 1.22
AC004540.1-201ENST00000439120 BTBD19C9JJ37 291 aa22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 SURF6O75683 361 aaKnown RBP22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 POLA2Q14181 598 aa22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 TTC39AQ5SRH9 613 aa22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 PI16Q6UXB8 463 aa22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 SSH3Q8TE77 659 aa22.69■■□□□ 1.22
AC004540.1-201ENST00000439120 CCDC158Q5M9N0 1113 aa22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 NOL9Q5SY16 702 aaKnown RBP22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 TBC1D9Q6ZT07 1266 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms