RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 WDR33Q9C0J8 1336 aaKnown RBP11.59□□□□□ -0.55
LSMEM1-202ENST00000439068 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
LSMEM1-202ENST00000439068 SCNN1AP37088 669 aa11.58□□□□□ -0.56
LSMEM1-202ENST00000439068 KCNA1Q09470 495 aa11.58□□□□□ -0.56
LSMEM1-202ENST00000439068 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
LSMEM1-202ENST00000439068 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
LSMEM1-202ENST00000439068 DICER1Q9UPY3 1922 aaKnown RBP11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 MYCP01106 439 aaPredicted RBP11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 NR3C2P08235 984 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 FOXC1Q12948 553 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 ABHD8Q96I13 439 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 PSMD1Q99460 953 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
LSMEM1-202ENST00000439068 KCNQ3O43525 872 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 ADH1CP00326 375 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 SEC13P55735 322 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 ERVK-9P63128 1117 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 PPP1R26Q5T8A7 1209 aaPredicted RBP11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 RPGRQ92834 1020 aaKnown RBP11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 CLP1Q92989 425 aaKnown RBP11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 PRIMPOLQ96LW4 560 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 OSBPL3Q9H4L5 887 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 SCN4AP35499 1836 aa11.56□□□□□ -0.56
LSMEM1-202ENST00000439068 CCDC85CA6NKD9 419 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 NEFMP07197 916 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 HSPA8P11142 646 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 MLLT1Q03111 559 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 MPNDQ8N594 471 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 SLX4Q8IY92 1834 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
LSMEM1-202ENST00000439068 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 PRMT3O60678 531 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 LILRA1O75019 489 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 MAP2K2P36507 400 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 GRM1Q13255 1194 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 CCDC116Q8IYX3 515 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 CAPNS2Q96L46 248 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
LSMEM1-202ENST00000439068 ERVV-1B6SEH8 477 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 CA12O43570 354 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 ADD1P35611 737 aaKnown RBP11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 PRKD2Q9BZL6 878 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 VPS33BQ9H267 617 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 RBM19Q9Y4C8 960 aaKnown RBP11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 ANKRD31Q8N7Z5 1873 aa11.53□□□□□ -0.56
LSMEM1-202ENST00000439068 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 KIF6Q6ZMV9 814 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 MCM10Q7L590 875 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 ZNF598Q86UK7 904 aaKnown RBP11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 HINFPQ9BQA5 517 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.57
LSMEM1-202ENST00000439068 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 HOXA10P31260 410 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 EPS15P42566 896 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 NR5A1Q13285 461 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 HLFQ16534 295 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 SWI5Q1ZZU3 235 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 SUPT20HQ8NEM7 779 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 ZNF358Q9NW07 568 aa11.51□□□□□ -0.57
LSMEM1-202ENST00000439068 SCN7AQ01118 1682 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 SCNN1DP51172 638 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 PPP1R42Q7Z4L9 355 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 ADARB2Q9NS39 739 aaKnown RBP11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
LSMEM1-202ENST00000439068 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms