RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 ZNF569Q5MCW4 686 aa20.72■□□□□ 0.91
KCNC4-204ENST00000438661 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
KCNC4-204ENST00000438661 TRMT44Q8IYL2 757 aaKnown RBP20.72■□□□□ 0.91
KCNC4-204ENST00000438661 BRMS1Q9HCU9 246 aa20.72■□□□□ 0.91
KCNC4-204ENST00000438661 L1RE1Q9UN81 338 aa20.72■□□□□ 0.91
KCNC4-204ENST00000438661 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
KCNC4-204ENST00000438661 CORO7P57737 925 aa20.71■□□□□ 0.91
KCNC4-204ENST00000438661 MYSM1Q5VVJ2 828 aa20.71■□□□□ 0.91
KCNC4-204ENST00000438661 TC2NQ8N9U0 490 aa20.71■□□□□ 0.91
KCNC4-204ENST00000438661 MED1Q15648 1581 aaPredicted RBP20.71■□□□□ 0.91
KCNC4-204ENST00000438661 APPP05067 770 aa20.71■□□□□ 0.91
KCNC4-204ENST00000438661 LTN1O94822 1766 aa20.71■□□□□ 0.91
KCNC4-204ENST00000438661 STX10O60499 249 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 CLIC6Q96NY7 704 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 ARHGAP23Q9P227 1491 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 CDC27P30260 824 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 PDE4BQ07343 736 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 SPECC1Q5M775 1068 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 LINS1Q8NG48 757 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 SLIT1O75093 1534 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 KIF28PB7ZC32 967 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 ANO1Q5XXA6 986 aa20.7■□□□□ 0.9
KCNC4-204ENST00000438661 DBNLQ9UJU6 430 aaKnown RBP20.7■□□□□ 0.9
KCNC4-204ENST00000438661 ZNF827Q17R98 1081 aa20.69■□□□□ 0.9
KCNC4-204ENST00000438661 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
KCNC4-204ENST00000438661 ZNF609O15014 1411 aa20.69■□□□□ 0.9
KCNC4-204ENST00000438661 FOXN1O15353 648 aa20.69■□□□□ 0.9
KCNC4-204ENST00000438661 AXDND1Q5T1B0 1012 aaPredicted RBP20.69■□□□□ 0.9
KCNC4-204ENST00000438661 MKRN1Q9UHC7 482 aaKnown RBP20.69■□□□□ 0.9
KCNC4-204ENST00000438661 LRRIQ3A6PVS8 624 aaPredicted RBP20.68■□□□□ 0.9
KCNC4-204ENST00000438661 CCDC175P0C221 793 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 LIG3P49916 1009 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 SPECC1LQ69YQ0 1117 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 EP400NLQ6ZTU2 488 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 HDAC5Q9UQL6 1122 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 RGPD2P0DJD1 1756 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 PXDNQ92626 1479 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 E7EWF7 191 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 KIF5CO60282 957 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 CMA1P23946 247 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 HAND2P61296 217 aa20.68■□□□□ 0.9
KCNC4-204ENST00000438661 CPLX1O14810 134 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 YEATS4O95619 227 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
KCNC4-204ENST00000438661 RIN2Q8WYP3 895 aaPredicted RBP20.67■□□□□ 0.9
KCNC4-204ENST00000438661 POLR3EQ9NVU0 708 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 CDC23Q9UJX2 597 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 PCDHA5Q9Y5H7 936 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 IGKV5-2P06315 115 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 MYL6BP14649 208 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 AKAP17AQ02040 695 aaKnown RBP20.67■□□□□ 0.9
KCNC4-204ENST00000438661 TFCP2Q12800 502 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 FOXP4Q8IVH2 680 aaPredicted RBP20.67■□□□□ 0.9
KCNC4-204ENST00000438661 CEP112Q8N8E3 955 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 DBNDD2Q9BQY9 259 aa20.67■□□□□ 0.9
KCNC4-204ENST00000438661 RNF40O75150 1001 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 MNAT1P51948 309 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 AMOTQ4VCS5 1084 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 DNAJC21Q5F1R6 531 aaKnown RBP20.66■□□□□ 0.9
KCNC4-204ENST00000438661 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 HNRNPLLQ8WVV9 542 aaKnown RBP20.66■□□□□ 0.9
KCNC4-204ENST00000438661 CDC5LQ99459 802 aaKnown RBP20.66■□□□□ 0.9
KCNC4-204ENST00000438661 SLC39A6Q13433 755 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 LONRF3Q496Y0 759 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 AIFM3Q96NN9 605 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 SALL1Q9NSC2 1324 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 KIF13AQ9H1H9 1805 aa20.66■□□□□ 0.9
KCNC4-204ENST00000438661 FAM71BQ8TC56 605 aa20.65■□□□□ 0.9
KCNC4-204ENST00000438661 GOLIM4O00461 696 aa20.65■□□□□ 0.9
KCNC4-204ENST00000438661 ABL1P00519 1130 aa20.65■□□□□ 0.9
KCNC4-204ENST00000438661 EXOSC10Q01780 885 aaKnown RBP20.65■□□□□ 0.9
KCNC4-204ENST00000438661 TADA2BQ86TJ2 420 aa20.65■□□□□ 0.9
KCNC4-204ENST00000438661 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.9
KCNC4-204ENST00000438661 PDIA6Q15084 440 aa20.64■□□□□ 0.9
KCNC4-204ENST00000438661 NOA1Q8NC60 698 aaKnown RBP20.64■□□□□ 0.9
KCNC4-204ENST00000438661 KCNH5Q8NCM2 988 aa20.64■□□□□ 0.9
KCNC4-204ENST00000438661 HINFPQ9BQA5 517 aa20.64■□□□□ 0.9
KCNC4-204ENST00000438661 CHRM1P11229 460 aaPredicted RBP20.64■□□□□ 0.89
KCNC4-204ENST00000438661 BMP6P22004 513 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 SHC4Q6S5L8 630 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 RAD9BQ6WBX8 426 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 SLC35F6Q8N357 371 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 C19orf44Q9H6X5 657 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
KCNC4-204ENST00000438661 SAMSN1Q9NSI8 373 aaKnown RBP20.64■□□□□ 0.89
KCNC4-204ENST00000438661 TUBE1Q9UJT0 475 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 PPFIA4O75335 1185 aa20.64■□□□□ 0.89
KCNC4-204ENST00000438661 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.64■□□□□ 0.89
KCNC4-204ENST00000438661 NFAT5O94916 1531 aa20.63■□□□□ 0.89
KCNC4-204ENST00000438661 CTAGE15A4D2H0 777 aa20.63■□□□□ 0.89
KCNC4-204ENST00000438661 CTAGE9A4FU28 777 aa20.63■□□□□ 0.89
KCNC4-204ENST00000438661 GOLGA8BA8MQT2 603 aa20.63■□□□□ 0.89
KCNC4-204ENST00000438661 CTAGE8P0CG41 777 aa20.63■□□□□ 0.89
KCNC4-204ENST00000438661 FMR1Q06787 632 aaKnown RBP eCLIP20.63■□□□□ 0.89
KCNC4-204ENST00000438661 TBX2Q13207 712 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms