RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 CAMK2GQ13555 558 aaPredicted RBP6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 MAP1SQ66K74 1059 aaPredicted RBP6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 ACSBG1Q96GR2 724 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 CEP41Q9BYV8 373 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 AKTIPQ9H8T0 292 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 SUGCTQ9HAC7 445 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 DDX41Q9UJV9 622 aaKnown RBP6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 ROBO2Q9HCK4 1378 aa6.14□□□□□ -1.43
LSM1P1-201ENST00000438629 F8W735 103 aaPredicted RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 TFE3P19532 575 aaPredicted RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 C9orf131Q5VYM1 1079 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 ANKRD34AQ69YU3 496 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 KIAA1211Q6ZU35 1233 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 SMG8Q8ND04 991 aaKnown RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 STK35Q8TDR2 534 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 TMPRSS13Q9BYE2 586 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 CCDC86Q9H6F5 360 aaKnown RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 COPRSQ9NQ92 184 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 SUPT16HQ9Y5B9 1047 aaKnown RBP6.13□□□□□ -1.43
LSM1P1-201ENST00000438629 PF4P02776 101 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 KIF4BQ2VIQ3 1234 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 SNAP47Q5SQN1 464 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 FDX2Q6P4F2 183 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 SHISA2Q6UWI4 295 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 GRIN3AQ8TCU5 1115 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 DCAF5Q96JK2 942 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 RHOVQ96L33 236 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 SPATA32Q96LK8 384 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 ZC3H12CQ9C0D7 883 aaKnown RBP6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 CCSER2Q9H7U1 834 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 TLR6Q9Y2C9 796 aa6.12□□□□□ -1.43
LSM1P1-201ENST00000438629 SART1O43290 800 aaKnown RBP6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 AOC2O75106 756 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 LIG1P18858 919 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 GNL2Q13823 731 aaKnown RBP6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 ADGRE1Q14246 886 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 ZNF394Q53GI3 561 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 KIAA0825Q8IV33 1275 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 GPBAR1Q8TDU6 330 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 WFDC12Q8WWY7 111 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 KCNQ5Q9NR82 932 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 PCDHA4Q9UN74 947 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 SNCAIPQ9Y6H5 919 aa6.11□□□□□ -1.43
LSM1P1-201ENST00000438629 WISP1O95388 367 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 ECEL1O95672 775 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 BPNT1O95861 308 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 RASSF7Q02833 373 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 HDXQ7Z353 690 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 VPS37DQ86XT2 251 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 GOLM1Q8NBJ4 401 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 GATAD2BQ8WXI9 593 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 NT5C1AQ9BXI3 368 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 PCDHB5Q9Y5E4 795 aa6.1□□□□□ -1.43
LSM1P1-201ENST00000438629 ZNF862O60290 1169 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 GREM1O60565 184 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 DLGAP3O95886 979 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 CTSBP07858 339 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 GLB1P16278 677 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 IREB2P48200 963 aaKnown RBP6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 RACK1P63244 317 aaKnown RBP6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 ID3Q02535 119 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 RPL6Q02878 288 aaKnown RBP6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 SOX4Q06945 474 aaPredicted RBP6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 RAD51AP2Q09MP3 1159 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 MBTPS1Q14703 1052 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 AKAP4Q5JQC9 854 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 RASIP1Q5U651 963 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 FBXL19Q6PCT2 694 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 Q6ZS46 218 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 TXNRD3Q86VQ6 643 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 TMEM151AQ8N4L1 468 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 WDR18Q9BV38 432 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 ADAMTS1Q9UHI8 967 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 PCDHGB7Q9Y5F8 929 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 TACC3Q9Y6A5 838 aa6.09□□□□□ -1.43
LSM1P1-201ENST00000438629 KRBA1A5PL33 1030 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 F6X3S4 739 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 CILPO75339 1184 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ALX3O95076 343 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 GDF11O95390 407 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 NOS3P29474 1203 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ZC3H6P61129 1189 aaKnown RBP6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ERVK-24P63145 666 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 FAM160A1Q05DH4 1040 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 COL9A2Q14055 689 aaPredicted RBP6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 SEPT6Q14141 434 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 MPP2Q14168 576 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 UVSSAQ2YD98 709 aa6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 ZC3H12AQ5D1E8 599 aaKnown RBP6.08□□□□□ -1.44
LSM1P1-201ENST00000438629 FAM196AQ6ZSG2 479 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms